Pairwise Alignments

Query, 278 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (331), Expect = 1e-35
 Identities = 84/246 (34%), Positives = 140/246 (56%), Gaps = 19/246 (7%)

Query: 15  DGTVALNGINFKAEKGEMIAILGPNGAGKSTTFLHFNGILKPSNGSVILKGEAIKYDNKS 74
           D   A++ ++    KGE+ A+LG +G+GKST      G  +P++G + L GE    D   
Sbjct: 31  DDVRAVDDVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRIYLDGE----DITD 86

Query: 75  LLNVRKTVGIVFQNPDDQLFAP-TVEQDVAFGPMNLGLSKEEIEKRVKDSLKAVSMEGFE 133
           L    + + ++FQ+    LF   TV Q++AFG     L K EIE+RV++ LK V ME + 
Sbjct: 87  LPPYERPINMMFQSY--ALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVHMEQYG 144

Query: 134 RKPPHHLSGGQKKRIAIAGILAMNPEIIVLDEPTSGLDPMGASQI-MKLLYELNRQGITI 192
           ++ PH LSGGQ++R+A+A  LA  P++++LDEP   LD    +Q+ ++++  L R G+T 
Sbjct: 145 KRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILERVGVTC 204

Query: 193 IISTHDVDLVPIYANKVYLLNEGKIIKGGTPREIFSD------SETVRSANL-----RLP 241
           ++ THD +     A ++ ++++G I + G+P +I+        +E + S NL      + 
Sbjct: 205 VMVTHDQEEAMTMAGRISIMSDGWIAQTGSPMDIYESPNSRMIAEFIGSVNLFSGEIEVD 264

Query: 242 RVAHLI 247
            V HLI
Sbjct: 265 EVDHLI 270