Pairwise Alignments

Query, 278 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (342), Expect = 5e-37
 Identities = 76/235 (32%), Positives = 140/235 (59%), Gaps = 5/235 (2%)

Query: 3   ILETRDLKYSYPDGTVALNGINFKAEKGEMIAILGPNGAGKSTTFLHFNGILKPSNGSVI 62
           ++   +L  SY D  V L GIN    +GE+++++GP+G+GKST     N +  P+ G + 
Sbjct: 1   MINITNLHKSYGDNAV-LKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIE 59

Query: 63  LKGEAIKYDNKSLLNVRKTVGIVFQNPDDQLFA-PTVEQDVAFGPMNLGL-SKEEIEKRV 120
           ++G++I   +  +  +R+ VG+VFQN +  LF   TV Q++   P++L L ++ E + + 
Sbjct: 60  IEGQSITAKDACVDKLRQKVGMVFQNFN--LFPHKTVLQNITLAPVSLKLMTQAEADNKA 117

Query: 121 KDSLKAVSMEGFERKPPHHLSGGQKKRIAIAGILAMNPEIIVLDEPTSGLDPMGASQIMK 180
              L  V ++      P  LSGGQK+R+AIA  LAM P++++ DEPTS LDP     ++ 
Sbjct: 118 LALLTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDVLD 177

Query: 181 LLYELNRQGITIIISTHDVDLVPIYANKVYLLNEGKIIKGGTPREIFSDSETVRS 235
           ++ +L ++G+T++I TH++      +++V  ++ G +++   P E+F+  +  R+
Sbjct: 178 VMKDLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEART 232