Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 472 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (518), Expect = 6e-57
 Identities = 134/442 (30%), Positives = 216/442 (48%), Gaps = 50/442 (11%)

Query: 21  SVEISVDIAMTHDGTTPLTVKAFEQISDKVWDNEKIVIIFDHNIPANTSKAANMQVITRE 80
           S  I +D  + H+ T+P   +       K W  +  +   DHN+P    +   ++ I  +
Sbjct: 23  SALIYIDRHIIHEVTSPQAFEGLRLAGRKPWRIDANIATPDHNVPTTPERKGGIEAIVDQ 82

Query: 81  FIKKQ-----------GIKNYYLDG--EGICHQVLPEKGHVKPNMIIAGADSHTCTHGAF 127
             + Q           GI  + ++   +GI H + PE+G   P M +   DSHT THGAF
Sbjct: 83  VSRLQVQTLDDNCDEYGIVEFKMNDVRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGAF 142

Query: 128 GAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE-NISGKDIILKTCKEVGRRGAT 186
           GA A G G +++ +V AT     +  + + V V G+    ++ KDI+L    ++G  G  
Sbjct: 143 GALAHGIGTSEVEHVLATQCLVAKKMKNMLVRVEGKLPFGVTAKDIVLAVIGKIGTAGGN 202

Query: 187 YMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEADDTTYRYLEN---AGVSREEIL 243
             ++E+ G+A+ +LS++ RM + NM+IE G + G++ AD  T  Y++    A    E  +
Sbjct: 203 GHAIEFAGSAIRDLSVEGRMTICNMSIEAGARVGLVAADKKTVEYVKGRPFAPKGAEWDM 262

Query: 244 ELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVKGVSE--------------- 288
            ++  K  V +++  +   +E D T ++ QV+    P+ V  V +               
Sbjct: 263 AVEAWKDLVSDADAKFDTVVELDATQIKPQVSWGTSPEMVLAVDQNVPDPAKEMDLVKRD 322

Query: 289 ----------------VEGTELNQVFIGSCTNGRLNDLRIAAKYLKGKKVNENTR-LIVI 331
                           +   +L++VFIGSCTN R+ DLR AA   KG+KV    +  IV+
Sbjct: 323 SIVRALKYMGLSANQAITDIQLDRVFIGSCTNSRIEDLRAAAVIAKGRKVASTIKQAIVV 382

Query: 332 PASKSIFKEALNEGLIDIFVDSGALICTPGCGPCLGAHQGVLGDGEVCLATTNRNFKGRM 391
           P S  +  +A  EGL  IF+++G     PGC  CL  +   L  GE C +T+NRNF+GR 
Sbjct: 383 PGSGLVKAQAEAEGLDKIFLEAGFEWREPGCSMCLAMNPDRLESGEHCASTSNRNFEGRQ 442

Query: 392 GNTNAQVYLSSPKIAAKSAVKG 413
           G    + +L SP +AA +AV G
Sbjct: 443 G-AGGRTHLVSPAMAAAAAVNG 463