Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 467 a.a., 3-isopropylmalate dehydratase large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  203 bits (516), Expect = 1e-56
 Identities = 140/462 (30%), Positives = 227/462 (49%), Gaps = 50/462 (10%)

Query: 2   TLAEKIISKNVGKNVYAKDSVEISVDIAMTHDGTTPLTVKAFEQISDKVWDNEKIVIIFD 61
           TL EKI   +V      +  + + +D  + H+ T+P       +    V    K     D
Sbjct: 6   TLYEKIYDAHVVVAAPGETPI-LYIDRHLVHEVTSPQAFDGLREKGRPVRQVSKTFATMD 64

Query: 62  HNIPANT---SKAANMQVITREFIKKQ----GIKNYYLDG--EGICHQVLPEKGHVKPNM 112
           HN+   T   + +  M  I  + + K     G+  Y ++   +GI H + PE G   P M
Sbjct: 65  HNVSTTTKDINASGEMARIQMQTLSKNCEEFGVTLYDINHKYQGIVHVMGPELGITLPGM 124

Query: 113 IIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGE-NENISGKD 171
            I   DSHT THGAFG+ A G G +++ +V AT        +T+++ V G+    I+ KD
Sbjct: 125 TIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQGRAKTMKIEVRGKVAPGITAKD 184

Query: 172 IILKTCKEVGRRGATYMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEADDTTYRY 231
           I+L    +    G T   +E+ G A+ +LSM+ RM + NMAIE+G KAG+I  D TT+ Y
Sbjct: 185 IVLAIIGKTTAAGGTGYVVEFCGEAIRDLSMEGRMTVCNMAIELGAKAGLIAPDATTFNY 244

Query: 232 LEN-----AGVSREEILELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVKGV 286
           ++       G   +  ++  +   T ++++ D   T+E   + ++ QV    +P  V  V
Sbjct: 245 IKGRKFAPQGSDWDAAVDYWQTLKTDEDAQFDAVVTLE--ASEIKPQVTWGTNPGQVIAV 302

Query: 287 SE-------------------------------VEGTELNQVFIGSCTNGRLNDLRIAAK 315
            E                               +   ++++VF+GSCTN R+ D+R AA 
Sbjct: 303 DEPIPSPSQFADPVERSSAEKALAYMGLEAGKMLSDYKVDKVFVGSCTNSRIEDMRAAAA 362

Query: 316 YLKGKKVNENTRLIVIPASKSIFKEALNEGLIDIFVDSGALICTPGCGPCLGAHQGVLGD 375
             KGKKV  + + +++P S+ +  +A  EGL  IF+++G     PGC  CL  +   LG 
Sbjct: 363 VAKGKKVASHVQALIVPGSEQVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLGP 422

Query: 376 GEVCLATTNRNFKGRMGNTNAQVYLSSPKIAAKSAVKGYITN 417
           GE C +T+NRNF+GR G  + + +L SP +AA +A+ G+  +
Sbjct: 423 GERCASTSNRNFEGRQGR-DGRTHLVSPAMAAAAAIAGHFVD 463