Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  390 bits (1001), Expect = e-112
 Identities = 257/859 (29%), Positives = 420/859 (48%), Gaps = 91/859 (10%)

Query: 13  DKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRI 72
           + ++ + W +E+ Y  ++   +    +   DGPPY +G IH+G A NKI+KD +++ K +
Sbjct: 25  EPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTL 84

Query: 73  QGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNHLGHMQG 132
            G++     GWD HGLPIE+ VE +     +     K+   EF  KC+E+A   +   + 
Sbjct: 85  SGFDAPYIPGWDCHGLPIELMVEKKVGKPGQ-----KVTAAEFREKCREYAAGQVEGQKE 139

Query: 133 QFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHE 192
            F+ LG+  +++  Y  +           L K  +   L K  +  +WC  C ++LAE E
Sbjct: 140 SFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGFKPVHWCTDCGSALAEAE 199

Query: 193 VRGEYKEVLDPSVYVKFKLE-----------------KSDEYITIWTTTPWTLPSNMLVC 235
           V  EYK  + PS+ V+FK                   K D  I IWTTTPWTLP+N  VC
Sbjct: 200 V--EYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIVIWTTTPWTLPANRAVC 257

Query: 236 VNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIGLK 295
           +  + +Y  + VE E    E  I+A +L   VM +A     I  F       G  L  ++
Sbjct: 258 LRADLEYVLIQVEGEQ--PERIIVASELAKSVMDRA----GIEHFHNLGFATGADLELVQ 311

Query: 296 YIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPV 355
           + HP                    + GDHVT + GTG+VHTAPG G++DF +G+++ + V
Sbjct: 312 FQHPFYSFTV------------PAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEV 359

Query: 356 YAPIDDNGKY--TDSIWKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTPLL 413
             P+  NG Y     ++ G  V   ++SV+E L  K  L++    +H+YPHCWR KTP++
Sbjct: 360 ANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPII 419

Query: 414 FRATEQWFLSISK--IKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGIPL 471
           FRAT QWF+S+ +  +++  +   K V W+PDW ++R    V+   +W ISRQR WG+P+
Sbjct: 420 FRATPQWFVSMEQAGLREQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPI 479

Query: 472 PIWICEEC-----GNYEVIGSVDELKERANEK---DVDLSDIHKPAVDKITLTCSCGGKM 523
            +++ +E       + ++I  V +L E+   +   D+D +++         L        
Sbjct: 480 ALFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAEL---------LGAEDAANY 530

Query: 524 KRTPDVLDVWYDSGLAPYASIGSKKL---KKAQFITEGNDQVTKWFYSQHALSAVVFDDT 580
           ++  D LDVW+DSG+   A + +++     +A    EG+DQ   WF S    S  +    
Sbjct: 531 EKVLDTLDVWFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKA 590

Query: 581 SYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWE---DLRF 637
            Y++ + HGF +D  G KMSKS+GN+V+P DVT + GAD+LR ++ S +   E       
Sbjct: 591 PYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEI 650

Query: 638 SYSEMDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDE---DAWILSRINTVAK 694
                D  R + NT   +  F AN   L+ F P  +    V+D    D W + R     +
Sbjct: 651 LKRSADAYRRIRNT---ARFFLAN---LNGFNPTTDIIP-VEDMVALDRWAVGRALAAQQ 703

Query: 695 EAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQT-LYYVIM 753
           E ++A +  +LH     L +F   +   +Y+ +I+DR +  K       + QT L++++ 
Sbjct: 704 EIIQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVE 763

Query: 754 KLISIMAPVTPHLSEEIYQNLKTEDMPES-----IFMNKL------TIESEFINETLEKD 802
            L+  MAP+    ++EI+  +  +    S     +F  +         E E +N     D
Sbjct: 764 ALVRWMAPIMSFTADEIWNAMPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWND 823

Query: 803 TEIIREIVDSILKGRDKAK 821
            + +R  V+ +L+     K
Sbjct: 824 IQKVRGSVNKLLENARNEK 842



 Score = 28.1 bits (61), Expect = 0.003
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 520 GGKMKRTPDVLDVWYDSGLAPYASI-GSKKLKKAQFITEGNDQVTKWFYSQHALSAVVFD 578
           G   KR P++L  WY   L  Y +I  +KK KK+  + +G        +  HAL+ ++ D
Sbjct: 19  GDLAKREPEMLQRWYQEDL--YGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKD 76