Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 909 a.a., valyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  218 bits (556), Expect = 1e-60
 Identities = 194/827 (23%), Positives = 356/827 (43%), Gaps = 102/827 (12%)

Query: 39  YYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEF 98
           Y  V  PP  +G++H+G A+   + D ++RF+R++G N L   G D   + ++  ++ + 
Sbjct: 42  YCIVIPPPNVTGSLHMGHAFEASLIDVLIRFQRMRGKNALWLPGTDHASIAVQTILDRQL 101

Query: 99  NIGSKKDIETKIGTQEFINKCKEFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMG 158
                   +  +G ++F+ +  ++     G + GQ   LGV +D+      +     +  
Sbjct: 102 REEGLSRYD--LGREKFLERAWQWKAESGGTIVGQLRRLGVSVDWSRERFTMDEGLSKAV 159

Query: 159 WWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHEVRGEYKEVLDPSVYVKFKLEKSDEYI 218
                + +E+ L+ +      WCP  ++++++ EV  E KEV     Y ++ L     ++
Sbjct: 160 LEAFIQLYEEGLIYRGQYLVNWCPASQSAVSDLEV--EMKEVDGSLWYFRYPLTDGSGHL 217

Query: 219 TIWTTTPWTLPSNMLVCVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDIS 278
            + TT P T+  +  V VNP+ D  Y +                                
Sbjct: 218 EVATTRPETMLGDTAVAVNPQ-DKRYQH-------------------------------- 244

Query: 279 KFSISKVVKGDSLIGLKYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAP 338
                       LIG     PL+     Q+E         I+    V  E GTG V   P
Sbjct: 245 ------------LIGKTITLPLV-----QREIP-------IIADPWVEAEFGTGCVKVTP 280

Query: 339 GFGEDDFNIGKEHNIPVYAPIDDNGKYTDSI--WKGTFVKDMDESVIETLISKNLLVNSG 396
               +DF +G+ H +P+   ++ +G   ++   ++G    +  ++V+  L     LV   
Sbjct: 281 AHDPNDFAMGQRHQLPLITVMNKDGTMNENAGQFEGLDRFEARKAVVAALEEAGFLVKVE 340

Query: 397 KVKHTYPHCWRCKTPLLFRATEQWFLSISKIKDSIIEQGKTVD---WVPD-WVKTRYVNG 452
             +H+ P   R K P+    + QWF+ I  +    +E     +   +VP+ W K  Y + 
Sbjct: 341 DYRHSIPISDRGKVPVEPLLSTQWFVKIEPLAQRALEALNGEEGPRFVPERWTKV-YRDW 399

Query: 453 VSFVGDWNISRQRYWGIPLPIWICEECGNYEVIGSVDELKERANEKDVDLSDIHKPAVDK 512
           +  + DW ISRQ +WG  +P W      N  V  S   +  ++ E +     I +   D 
Sbjct: 400 LENLRDWCISRQLWWGHQIPAWYAVSETNGVVTDSTPFVVAKSAE-EAQQQAIAQFGPDV 458

Query: 513 ITLTCSCGGKMKRTPDVLDVWYDSGLAPYASIG-------SKKLKKAQFITEGNDQVTKW 565
           +         +++  DVLD W+ SGL P++++G        +       +  G D +  W
Sbjct: 459 V---------LQQDEDVLDTWFSSGLWPFSTLGWPNQTEDLETFYPTSTLVTGFDIIFFW 509

Query: 566 FYSQHALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYL 625
                 ++        ++   +HG   DE  +KMSKS GN + P  + ++YG D LR+ L
Sbjct: 510 VARMTMMAGHFTGKMPFKDVYIHGLVRDENNKKMSKSAGNGIDPLILIDRYGTDALRYAL 569

Query: 626 L-SANKAWEDLRFSYSE-------MDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKH 677
           +     A +D+R  Y+        ++ +R+  N +WN+  F    + LDD  P       
Sbjct: 570 IREVVGAGQDIRLDYNRKTDESATVETSRNFANKVWNASRFV--MLNLDDKTPEQLGMAA 627

Query: 678 VKD---EDAWILSRINTVAKEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWM 734
             D    D WILSR +   +  +  +E   L      L +FI  DF  WYI+L++ R + 
Sbjct: 628 TADLELADRWILSRYHATTEALINQIEAYDLGAAAKQLYEFIWGDFCDWYIELVKPRLYG 687

Query: 735 EKNDVQ-KLSAYQTLYYVIMKLISIMAPVTPHLSEEIYQNLKTEDMPESIFMNKL-TIES 792
           E  D Q +L A QTL  ++  ++ ++ P  PH++EEI+  L      + + +      +S
Sbjct: 688 E--DAQSRLVAQQTLAQILEGILRLLHPFMPHVTEEIWHTLNQVGEDQFLALQSFPQPQS 745

Query: 793 EFINETLEKDTEIIREIVDSILKGRDKAKYTLRYPITKITLPENIAE 839
           E+I   L+++ +++ +++ ++   R +A       IT I   ++ +E
Sbjct: 746 EWIQPELDREFQLMIDVIRTLRNLRAEAGLKPGQKITAILQSDSESE 792