Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  384 bits (986), Expect = e-110
 Identities = 254/865 (29%), Positives = 423/865 (48%), Gaps = 87/865 (10%)

Query: 8   NFRELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVL 67
           N    +  + E W K+  Y++++        +   DGPPY +G+IH+G + NKI+KD ++
Sbjct: 20  NLANREPAMLERWNKDKLYQQIRDSRIGRKPFILHDGPPYANGSIHIGHSVNKILKDIII 79

Query: 68  RFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNHL 127
           + K + G++     GWD HGLPIE+KVE +     +     KI   EF  +C+++A   +
Sbjct: 80  KSKTLAGFDAPYVPGWDCHGLPIELKVEQKVGKPGQ-----KISAAEFREECRKYAAAQV 134

Query: 128 GHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCETS 187
              +  F  LGV  D+   Y+ +          +L K      L K ++  +WC  C ++
Sbjct: 135 DGQREDFIRLGVLGDWHKPYLTMDFATEANIVRSLAKVISNGHLQKGVKPVHWCTDCGSA 194

Query: 188 LAEHEVRGEYKEVLDPSVYVKFKL--------------EKSDEYITIWTTTPWTLPSNML 233
           LAE EV  EY++   P++ V F +                 D  + IWTTTPWTLP+N  
Sbjct: 195 LAEAEV--EYEDKTSPAIDVGFNVVDKPALLAKFGVAQYNHDIAMVIWTTTPWTLPANRA 252

Query: 234 VCVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIG 293
           + +  + +Y  V+   E+ T    ++A+ L  D +K+         F +   +KG  L  
Sbjct: 253 LAIAADLEYVLVSFTKEDVT-RAIVVADVLHEDCVKRF----GAESFEVLGRIKGSELEL 307

Query: 294 LKYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNI 353
            ++ HP L+ +              ++ GDHVT + GTG+VHTAPG G+DDF +G+++ +
Sbjct: 308 TRFAHPFLDFDV------------PVILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGL 355

Query: 354 PVYAPIDDNGKY--TDSIWKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTP 411
            V  P+ DNG Y      + G  V   +++V+  L  K  L+N    +H+YPHCWR KTP
Sbjct: 356 EVANPVGDNGVYKADTPFFAGQHVFKANDNVVALLKEKGALLNHVAYRHSYPHCWRHKTP 415

Query: 412 LLFRATEQWFLSISK--IKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGI 469
           ++FRAT QWF+S+    ++ + + + +   W+PDW ++R    V+   DW ISRQR WG+
Sbjct: 416 IIFRATPQWFISMDNQGLRSTALSEIQNTQWIPDWGQSRIETMVANRPDWCISRQRTWGV 475

Query: 470 PLPIWICEECGNYEVIGSVDELKERANEKDVDLSDIHKPAVDKITLTCSCGGKMKRTPDV 529
           P+ +++ +E  N E+  +   L ER   +           +D   L      + ++  D 
Sbjct: 476 PITLFVNKE--NEELHPNSVSLMERVANRIEQHGIQAWWDLDAAELLGDEAEQYRKVTDT 533

Query: 530 LDVWYDSGLAPYASIGSKKLKKAQFI---TEGNDQVTKWFYSQHALSAVVFDDTSYEKCM 586
           LDVWYDSG      + ++   +   +    EG+DQ   WF S   LS  +     Y++ +
Sbjct: 534 LDVWYDSGSTFETVVAARPEFQGHGVDLYLEGSDQHRGWFMSSLMLSTAMHAKAPYKQVL 593

Query: 587 MHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEMDETR 646
            HGFT+D  G KMSKS+GN+++P +VT + GAD+LR ++ + + +         EM  + 
Sbjct: 594 THGFTVDGKGRKMSKSIGNVIAPQEVTNKLGADILRLWVAATDYS--------GEMSVSD 645

Query: 647 SMLNTLWNSYAFSAN-----YMVLDDFVPNNEYFKHVKDE---DAWILSRINTVAKEAVE 698
            +LN   +SY    N        L+ F P  +    V D    D W++ R   V  E + 
Sbjct: 646 EILNRAADSYRRIRNTGRFLLANLNGFEPEADMVA-VADMVALDRWMVRRAAKVQSEIIA 704

Query: 699 ALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQ-KLSAYQTLYYVIMKLIS 757
           A E+ + H+ T  L  F   +   +Y+ +I+DR +  K +   + S    L+++   ++ 
Sbjct: 705 AYEQYNFHLVTHKLMQFCSVELGSFYLDIIKDRQYTAKRESHARRSCQSALFHIAEAMVR 764

Query: 758 IMAPVTPHLSEEIYQNLK--------TEDMPESIFMNKLTIESEF----------INETL 799
            +APV    ++EI+Q L         T++  E   +  +T+ES+           +   +
Sbjct: 765 WIAPVLSFTADEIWQLLPGKREAYVFTQEWYEG--LESITLESDLADSHWELLLSVRNEV 822

Query: 800 EKDTEIIREIVDSILKGRDKAKYTL 824
            K+ E  R   D +L G  +A  TL
Sbjct: 823 NKELEQARR--DKVLGGSLEATVTL 845