Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 953 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  180 bits (456), Expect = 5e-49
 Identities = 180/860 (20%), Positives = 336/860 (39%), Gaps = 185/860 (21%)

Query: 5   KSVNFRELDKKVKEYWKKENTYKKVKALNEHGP----EYYFVDGPPYCSGAIHLGTAWNK 60
           K+ N + +++ +   W+++  +K       HG      Y  +  PP  +G++H+G A+  
Sbjct: 3   KTYNPQSIEQALYRVWEEKGYFKP------HGDASQGNYCIMIPPPNVTGSLHMGHAFQD 56

Query: 61  IIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCK 120
            I DT++R++R++G N L + G D  G+  ++ VE +      K     +G   F+ K  
Sbjct: 57  TIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEQGKS-RHDLGRDAFMEKVW 115

Query: 121 EFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYW 180
           E+     G +  Q   +G  +D++     +             + ++ +L+ +  R   W
Sbjct: 116 EWKAQSGGTITSQLRRMGASVDWDRERFTMDEGLSNAVQEVFVRLYDDKLIYRGKRLVNW 175

Query: 181 CPRCETSLAEHEVRGEYKEVLDPSVYVKFKLEKSD------EYITIWTTTPWTLPSNMLV 234
            P+  T++++ EV  E KE      + ++ L  ++      +Y+ + TT P T+  +  V
Sbjct: 176 DPKLHTAISDLEV--ENKEKAGHMWHFRYPLAGTELTADGKDYLVVATTRPETMLGDSAV 233

Query: 235 CVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIGL 294
            V+PE D  Y                                             SLIG 
Sbjct: 234 AVHPE-DERYA--------------------------------------------SLIGK 248

Query: 295 KYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIP 354
           + I P++                 I+  ++V  + GTG V   P    +D+ +GK H++P
Sbjct: 249 EIILPIVNRRIP------------IIADEYVDKDFGTGCVKITPAHDFNDYEVGKRHSLP 296

Query: 355 VYAPIDDNGKY--------TDSIWKGTFVKDMDESV------IETLISKNLLVNS----G 396
           ++  +  +           TD    G+   ++D S+      ++   +++ +V      G
Sbjct: 297 MFNILTQDATIRALAEVLNTD----GSHNSELDASLPERYAGLDRFKARDAIVAEFETLG 352

Query: 397 KVKHTYPHCWRCK---------TPLLFRATEQWFLSISKIKDSIIE--QGKTVDWVPDWV 445
            ++   PH  +            PLL   T+QW++++ K+    IE  +   + +VP   
Sbjct: 353 LLEKIEPHALKVPYGDRSGVVIEPLL---TDQWYVAVQKLAQPAIEAVENGDIKFVPQQY 409

Query: 446 KTRYVNGVSFVGDWNISRQRYWGIPLPIWICEECGNYEVIGSVDELKERANEKDVDLSDI 505
           +  Y + +  + DW ISRQ +WG  +P W  +E G   V  S DE+++  N      SD+
Sbjct: 410 ENMYFSWMRDIQDWCISRQLWWGHRIPAWY-DEAGKVYVGRSEDEVRQNHNLG----SDV 464

Query: 506 HKPAVDKITLTCSCGGKMKRTPDVLDVWYDSGLAPYASIG-------SKKLKKAQFITEG 558
                           K+++  DVLD W+ S L  ++++G        K       +  G
Sbjct: 465 ----------------KLRQDDDVLDTWFSSALWTFSTLGWPEQTPELKTFHPTDVLVTG 508

Query: 559 NDQVTKWFYSQHALSAVVFDDTS------YEKCMMHGFTLDETGEKMSKSLGNIVSPDDV 612
            D +  W      ++     D        ++   + G   DE G KMSKS GN++ P D+
Sbjct: 509 FDIIFFWVARMIMMTMYFIKDEDGKPQVPFKTVYVTGLIRDEAGNKMSKSKGNVLDPLDM 568

Query: 613 T-------------------------------------EQYGADVLRFYLLSANKAWEDL 635
                                                 E +G D LRF L +      D+
Sbjct: 569 IDGIDLESLVQKRTGNMMQPQLAAKIEKSTRKEFENGIEPHGTDALRFTLAAMASTGRDI 628

Query: 636 RFSYSEMDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDEDAWILSRINTVAKE 695
            +    +D  RS  N LWN+  +        D        K +   D W++ +     K 
Sbjct: 629 NWDMKRLDGYRSFCNKLWNASRYVLMNTEEQDCGQGGGDMK-LSLADRWVIGKFQETVKA 687

Query: 696 AVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKL 755
             E +      +    L +F  N F  WY++L +       ++ ++     TL  V+ +L
Sbjct: 688 FDEHINAYRFDLAANTLYEFTWNQFCDWYLELTKP-VLQNGSEAEQRGTRHTLVTVLEQL 746

Query: 756 ISIMAPVTPHLSEEIYQNLK 775
           + +M P+ P+++E I+  +K
Sbjct: 747 LRLMHPMMPYITETIWDRVK 766