Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 879 a.a., Valyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  154 bits (389), Expect = 3e-41
 Identities = 115/473 (24%), Positives = 205/473 (43%), Gaps = 36/473 (7%)

Query: 319 IVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPVYAPIDDNGKYTDSI---WKGTFV 375
           I+  D+     G+G V   P    +DF +G+ HN+P+   +D N K   ++   ++G   
Sbjct: 256 IIADDYADPTKGSGAVKITPAHDFNDFEVGRRHNLPMINILDMNAKLNGNVPQAYQGLDR 315

Query: 376 KDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTPLLFRATEQWFLSISKIKDS---II 432
               + VI    + +LL        T P+  R    +    T+QWF+  +K+       +
Sbjct: 316 FVARDKVIAEFEALDLLEKIEDNPMTQPYGDRSGVIIEPWLTDQWFVDAAKLAVEPIRAV 375

Query: 433 EQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGIPLPIWICEECGNYEVIGSVDELK 492
           E+G+T  +VP   +  +   +  +  W ISRQ +WG  +P W   + G   V  + DE +
Sbjct: 376 EEGRT-RFVPKHWENTFFEWMRNIQPWCISRQIWWGHQVPAWYGPD-GTIFVEETEDEAR 433

Query: 493 ERANEKDVDLSDIHKPAVDKITLTCSCGGKMKRTPDVLDVWYDSGLAPYASIG------- 545
             A++        H     ++T          R  DVLD W+ S L P++++G       
Sbjct: 434 TAAHD--------HYGVATELT----------RDTDVLDTWFSSALWPFSTLGWPDQTPE 475

Query: 546 SKKLKKAQFITEGNDQVTKWFYSQHALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGN 605
             +      +  G D +  W      +   V  D  +    +H    DE G+KMSKS GN
Sbjct: 476 LARYYPGDVLVTGFDIIFFWVARMMMMGHYVMGDVPFRDVYIHALVRDEKGQKMSKSKGN 535

Query: 606 IVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL 665
           ++ P D+T+QYG D LRF L++      D++ S   +   R+    LWN+  F      L
Sbjct: 536 VIDPLDMTDQYGTDALRFTLIAMAAQGRDIKMSEQRVAGYRNFCTKLWNAARFCQMNDCL 595

Query: 666 DDFVPNNEYFKHVKDEDAWILSRINTVAKEAVEALEKPHLHVYTWALRDFILNDFSRWYI 725
              V +    +H  +   WI ++    A +  EA+E    +        F+ N F  WY+
Sbjct: 596 PQPVFDPTTARHTLNR--WIGAKTEDCAAKVAEAIEAYRFNDAAQVAYGFVWNTFCDWYL 653

Query: 726 KLIRDRTWMEKNDVQKLSAYQTLYYVIMKLISIMAPVTPHLSEEIYQNLKTED 778
           ++ +      ++ V K        +V+  ++ I+ P+ P ++EE+++ +   +
Sbjct: 654 EMAKP-ILQGEDGVTKAETQAMAAWVLDTILHILHPMMPFITEELWEKIAARE 705



 Score = 71.6 bits (174), Expect = 2e-16
 Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 5/202 (2%)

Query: 39  YYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEF 98
           Y  +  PP  +G++H+G A    ++DT++R+ R+ G + L + G D  G+  ++ VE + 
Sbjct: 36  YTIMMPPPNVTGSLHMGHALTFTLQDTLIRYHRMSGRDALWQPGSDHAGIATQMVVERQ- 94

Query: 99  NIGSKKDIETKIGTQEFINKCKEFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMG 158
            +  K      +G + FI+K  E+  +  G +Q Q   LG   D+      +     +  
Sbjct: 95  -LAGKGITRHDLGREAFISKVWEWKAHSGGTIQRQLRRLGASPDWPRERFTMDDGLSKAV 153

Query: 159 WWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHEVRGEYKEVLDPSVYVKFKLE-KSDEY 217
                + H+  L+ +D R   W P   T++++ EV  E +E      ++++ ++ +   +
Sbjct: 154 RKVFVRLHKDGLIYRDKRLVNWDPVLHTAISDLEV--EQRETKGKLWHLRYPVDGQKGRF 211

Query: 218 ITIWTTTPWTLPSNMLVCVNPE 239
           I + TT P T+  +  V V+PE
Sbjct: 212 IVVATTRPETMLGDTAVAVHPE 233