Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  397 bits (1019), Expect = e-114
 Identities = 246/850 (28%), Positives = 434/850 (51%), Gaps = 97/850 (11%)

Query: 8   NFRELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVL 67
           N  + + ++ + W ++  Y+K++        +   DGPPY +G+IH+G + NKI+KD ++
Sbjct: 20  NLAQREPEMLKSWTEKKLYQKIRESRTGAKPFILHDGPPYANGSIHIGHSVNKILKDIII 79

Query: 68  RFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNHL 127
           + K + G++     GWD HGLPIE+KVE +     +     K+   EF  KC+E+A   +
Sbjct: 80  KSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGQ-----KVSAAEFRQKCREYAAAQV 134

Query: 128 GHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCETS 187
              +  F  LGV  D++N Y+ +  D       +L K  +   L K ++  +WC  C ++
Sbjct: 135 DGQREDFIRLGVLGDWQNPYLTMNFDTEANIVRSLAKVIDNGHLHKGVKPVHWCTDCGSA 194

Query: 188 LAEHEVRGEYKEVLDPSVYV------------KFKLEKSDEYI--TIWTTTPWTLPSNML 233
           LAE EV  EY++   P++ V            KF LE+SD  +   IWTTTPWTLP+N  
Sbjct: 195 LAEAEV--EYEDKTSPAIDVAFVAVDQAAVLAKFGLEQSDAEVATVIWTTTPWTLPANRG 252

Query: 234 VCVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIG 293
           + +  + DY  V    ++G+    I+A++LV   +++          S+   VKG +L  
Sbjct: 253 LSMAGDIDYDLVEFT-KDGSKRAIIVAQELVESCIER----YGAELHSVLGTVKGQALEL 307

Query: 294 LKYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNI 353
           L++ HP  + +              ++ GDHVT++ GTG+VHTAPG G+DDF IG+++ +
Sbjct: 308 LRFKHPFYDFDV------------PVIIGDHVTVDSGTGVVHTAPGHGQDDFVIGQKYGL 355

Query: 354 PVYAPIDDNGKY--TDSIWKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTP 411
            V  P+ DNG Y      + G  V   +++V+  L  K  L+N    +H+YPHCWR KTP
Sbjct: 356 EVANPVGDNGVYKPDTEFFAGQHVFKANDNVVALLEEKGALLNHVAYRHSYPHCWRHKTP 415

Query: 412 LLFRATEQWFLSISK--IKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGI 469
           ++FRAT QWF+S+ +  ++   + + +   W+PDW ++R    V    DW ISRQR WG+
Sbjct: 416 IIFRATPQWFISMDQKGLRTQSLSEIEKTQWIPDWGQSRIEKMVENRPDWCISRQRTWGV 475

Query: 470 PLPIWICEECGNY--EVIGSVDELKERANEK------DVDLSDIHKPAVDKITLTCSCGG 521
           P+ +++  +      + +  ++ +  R  ++      D+D +++     D          
Sbjct: 476 PITLFVHRDTEELHPDSVALMERVAHRIEQEGIQAWWDLDAAELLGEEAD---------- 525

Query: 522 KMKRTPDVLDVWYDSGLAPYASIGSKKLK----KAQFITEGNDQVTKWFYSQHALSAVVF 577
           + ++  D LDVWYDSG + ++S+ + + +          EG+DQ   WF S   +S  + 
Sbjct: 526 QYRKVTDTLDVWYDSG-STFSSVVAARPEYNGHPVDLYLEGSDQHRGWFMSSLMISTAMN 584

Query: 578 DDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRF 637
               Y++ + HGFT+D  G KMSKS+GN+++P  VT + GAD+LR ++ + + + E    
Sbjct: 585 GKAPYKQVLTHGFTVDGQGRKMSKSIGNVIAPLQVTNKLGADILRLWVAATDYSGE---- 640

Query: 638 SYSEMDETRSMLNTLWNSYAFSANYMV--LDDFVPNNE--YFKHVKDEDAWILSRINTVA 693
             +  DE        +     +A +++  L+ F P N+    + +   D W++ R   + 
Sbjct: 641 -MTVSDEILKRSADAYRRIRNTARFLLANLNGFDPVNDTVAIEDMVALDRWVVRRAAALQ 699

Query: 694 KEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKND-VQKLSAYQTLYYVI 752
            E +EA E+ + H+ T  L  F   +   +Y+ +I+DR +  K D + + S    L+ + 
Sbjct: 700 AEILEAYEQYNFHLVTQKLMQFCSVELGSFYLDIIKDRQYTAKRDSLARRSCQSALFLIA 759

Query: 753 MKLISIMAPVTPHLSEEIYQNLKTE---------------------DMPESIFMNKLTIE 791
             ++  +AP+    ++E++Q+L  E                     D+ +  + N +T+ 
Sbjct: 760 EAMVRWIAPILSFTADEVWQSLPGEREEFVFTQTWFEGLVSVTLDSDLSDDYWANLITVR 819

Query: 792 SEFINETLEK 801
            E +N+ +E+
Sbjct: 820 DE-VNKAIEQ 828