Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 938 a.a., isoleucyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  413 bits (1062), Expect = e-119
 Identities = 273/842 (32%), Positives = 430/842 (51%), Gaps = 98/842 (11%)

Query: 8   NFRELDKKVKEYWKKENTY-KKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTV 66
           N  + + ++   W+K++ Y   V+A  + G  Y   DGPPY +G IH+G A NKI+KD +
Sbjct: 20  NLTQREPEMLRKWEKDDAYGAMVRASGQQGT-YVLHDGPPYANGNIHMGHALNKILKDII 78

Query: 67  LRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNH 126
           ++ + +QG+      GWD HGLPIE+KVE+E  +G KK     +       +C+++A  +
Sbjct: 79  VKSRNLQGFKAEYVPGWDCHGLPIELKVEHE--LGEKK---RTMPAHAVRKRCRQYAEKY 133

Query: 127 LGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCET 186
           L   + +F+ LGV+  ++  Y+ +   Y       L     K  L +  +  YWC  C+T
Sbjct: 134 LDIQRKEFKRLGVFGAWDKPYVTMHPSYEAATARELGNFAAKGGLVRSKKPIYWCCSCQT 193

Query: 187 SLAEHEVRGEYKEVLDPSVYVKFKL------------EKSDEYITIWTTTPWTLPSNMLV 234
           +LAE EV  EY +   PSV+V+F L            + +  YI IWTTTPWTLP NM V
Sbjct: 194 ALAEAEV--EYHDHTSPSVHVRFPLRDPRVAEVLPGVDPAHAYIVIWTTTPWTLPDNMAV 251

Query: 235 CVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMK--KAEKNNDISKFSISKVVKGDSLI 292
            V+P+FDY  V         +  I+AE L+   +K  K +++  +++      + G +L 
Sbjct: 252 AVHPDFDYVVV-----RHGGDFHIVAEGLLEACLKAFKWDEHEVVAR------IGGRALE 300

Query: 293 GLKYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHN 352
           GLK  HP  +                IV  D+VTLE GTG VHTAPG G +D+  G  + 
Sbjct: 301 GLKATHPFYDRPS------------PIVLADYVTLESGTGCVHTAPGHGREDYETGLRYG 348

Query: 353 IPVYAPIDDNGKYTDSI--WKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKT 410
           + +Y+P+ D G+Y D +  + G  + + +  VIE L     L+  G++ H+YPHCWRCK 
Sbjct: 349 LDIYSPLTDEGRYLDCVEFFAGMTIFEANPKVIEKLREVGNLLAEGRITHSYPHCWRCKK 408

Query: 411 PLLFRATEQWFLSI------SKIKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQ 464
           P++FRAT QWF+++       K  D+I +    V W+P W + R  N + F  DW ISRQ
Sbjct: 409 PVIFRATTQWFIAMERNDLRQKALDAIRDD---VRWIPSWGQERIHNMIEFRPDWCISRQ 465

Query: 465 RYWGIPLPIWICEECGNYEVIGSVDELKERANE-----------KDVDLSDIHKPAVDKI 513
           R WG+P+   +CE+CG  E     D +++ A              + DLSDI  PA    
Sbjct: 466 RMWGVPIVALLCEDCG--EAWNDADWMRDIAERFAKHATGCDYWYETDLSDI-VPA---- 518

Query: 514 TLTC-SCGG-KMKRTPDVLDVWYDSGLAPYASIGSKKLK---KAQFITEGNDQVTKWFYS 568
            L C  CGG   K+  D+LDVW+DSG + +A++  ++ +    A    EG+DQ   WF+S
Sbjct: 519 GLRCPKCGGDHWKKETDILDVWFDSGTS-FAAVVEQREECGFPADLYLEGSDQHRGWFHS 577

Query: 569 QHALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSA 628
               S        Y   + HG+ +D  G KMSKS+GN+V+P ++ +++GA+VLR ++ S 
Sbjct: 578 SLLASIGTRGVPPYRSVLTHGYVVDGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVASV 637

Query: 629 NKAWEDLRFSYSEMDETRSMLNTLWNSYAFSAN---YMV--LDDFVPNNEY-FKHVKDED 682
           +   ED+R S         +LN L ++Y    N   Y++  + D  P     F+ +   D
Sbjct: 638 DYR-EDIRIS-------EEILNRLVDAYRRIRNTCRYLLGNISDLTPETMVPFEAMDPLD 689

Query: 683 AWILSRINTVAKEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQ-K 741
            + L   +   +   +A  +   H     L +  + D S +Y+ +++DR +    D   +
Sbjct: 690 RFALDLASRAHERIQDAYTEYEFHKVFHTLHNLCVTDLSAFYLDILKDRLYSSAADSHAR 749

Query: 742 LSAYQTLYYVIMKLISIMAPVTPHLSEEIYQNLKTEDMPE--SIFMNKLTIESEFINETL 799
            SA   LY ++M ++  MAPV    +EE++  +     P+  S+F    T    F  +T 
Sbjct: 750 RSAQTALYRILMLMVRDMAPVLSFTAEEVFGYVPAALRPDVISVFALPATDAPAFTLDTT 809

Query: 800 EK 801
            +
Sbjct: 810 SR 811