Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 879 a.a., valyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  209 bits (531), Expect = 9e-58
 Identities = 193/885 (21%), Positives = 362/885 (40%), Gaps = 122/885 (13%)

Query: 1   MKQVKSVNFRELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNK 60
           M+     N  +++ K  +YW +   +       E    Y  V  PP  +G +H+G   N 
Sbjct: 1   MELASKYNPADVEGKWYQYWLEHRLFSSKPDGRE---PYTIVIPPPNVTGVLHMGHMLNN 57

Query: 61  IIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCK 120
            I+D ++R  R++G N     G D   +  E KV N+      K  +T +   EF+    
Sbjct: 58  TIQDILVRRARMEGKNACWVPGTDHASIATEAKVVNKLAAQGIK--KTDLTRDEFLKHAW 115

Query: 121 EFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYW 180
           ++   H G +  Q   LG   D++     +  +  +         + K L+ + +R   W
Sbjct: 116 DWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSKSVLKVFVDLYNKGLIYRGVRMVNW 175

Query: 181 CPRCETSLAEHEVRGEYKEVLDPSVYVKFKLEKSDE--YITIWTTTPWTLPSNMLVCVNP 238
            P+  T+L++ EV   YKE      Y+++K+E   E  Y  + TT P T+  +  +C+NP
Sbjct: 176 DPKALTALSDEEVI--YKEEHGKLFYLRYKVEGDPEGRYAVVATTRPETIMGDTAMCINP 233

Query: 239 EFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIGLKYIH 298
                       N     W                                 L G K I 
Sbjct: 234 ------------NDPKNAW---------------------------------LKGKKVIV 248

Query: 299 PLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPVYAP 358
           PL            +  V  ++  D+V +E GTG +   P    +D+ +G+++N+P    
Sbjct: 249 PL------------VNRVIPVIEDDYVDIEFGTGCLKVTPAHDVNDYMLGEKYNLPSIDI 296

Query: 359 IDDNGKYTDS--IWKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTPLLFRA 416
            +DNG  +++  ++ G    D+ + + + L +  LL  +    +   +  R    +  + 
Sbjct: 297 FNDNGTLSEAAGLYIGMDRFDVRKQIEKDLDAAGLLEKTEAYTNKVGYSERTNVVIEPKL 356

Query: 417 TEQWFLSISKIKDSIIE--QGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGIPLPIW 474
           + QWFL +    D  +       + + P   K  Y + +  + DW ISRQ +WG  +P +
Sbjct: 357 SMQWFLKMQHFADMALPPVMNDELKFYPAKYKNTYRHWMENIKDWCISRQLWWGHRIPAY 416

Query: 475 ICEECGNYEVIGSVDELKERANEKDVDLSDIHKPAVDKITLTCSCGGKMKRTPDVLDVWY 534
              E G Y V  + +E   +A EK                LT      +++  D LD W+
Sbjct: 417 FLPE-GGYVVAATPEEALAKAKEK-----------TGNAALTMD---DLRQDEDCLDTWF 461

Query: 535 DSGLAPYASI------GSKKLK---KAQFITEGNDQVTKWFYSQHALSAVVFDDTSYEKC 585
            S L P +        G++++        +  G D +  W      +         ++  
Sbjct: 462 SSWLWPISLFDGINHPGNEEISYYYPTSDLVTGPDIIFFWVARMIMVGYEYEGKMPFKNV 521

Query: 586 MMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEMDET 645
              G   D+ G KMSKSLGN   P ++ ++YGAD +R  ++ A  A  D+ F  +  ++ 
Sbjct: 522 YFTGIVRDKLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQG 581

Query: 646 RSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDEDAWILSRINTVAKEAVEALEKPHL 705
           R+  + +WN++     + V D+   ++      K    W  S+ N VA E  +   K  L
Sbjct: 582 RNFCSKIWNAFRLIKGWTVDDNIQASDA----AKLAVHWFESKQNEVAAEVADLFSKYRL 637

Query: 706 HVYTWALRDFILNDFSRWYIKLIR-------DRTWMEKNDVQKLSAYQTLYYVIMKLISI 758
                A+     ++FS WY+++I+       DRT            Y      +  L+ +
Sbjct: 638 SEALMAVYKLFWDEFSSWYLEMIKPAYGQGIDRT-----------TYSATLCFLDNLLHL 686

Query: 759 MAPVTPHLSEEIYQNL--KTEDMPESIFMNKLTIESEFINETLEKDTEIIREIVDSILKG 816
           + P  P ++EE++Q +  +  +  ES+ ++ L++++ +++       E+++ ++ +I   
Sbjct: 687 LHPFMPFITEELWQQMYERNAEEGESLMVSALSMDT-YVDTAFVAQFEVVKGVISNIRSI 745

Query: 817 RDKAKYTLRYPITKITLPENIAETVEKYGYIIKEQGNVKEIELKE 861
           R +     + P+    L EN    V ++  +I++  N+  I + E
Sbjct: 746 RLQKNIAQKEPLDLQVLGEN---PVAEFNAVIQKMCNLSSITVVE 787