Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 1162 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  521 bits (1342), Expect = e-151
 Identities = 342/1129 (30%), Positives = 552/1129 (48%), Gaps = 141/1129 (12%)

Query: 11   ELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFK 70
            +++K V + W +   + K     +  P + F +GPP  +G   +     + IKD   R+K
Sbjct: 15   QVNKDVLKKWDENQVFAKSMTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYK 74

Query: 71   RIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNHLGHM 130
             ++GY V  KAGWD HGLP+E+ VE    I +K+DI  KI   ++   C++  + +    
Sbjct: 75   TMKGYQVKRKAGWDTHGLPVELSVEKALGI-TKEDIGKKISVADYNAACRKDVMKYTKEW 133

Query: 131  QGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAE 190
            +     +G W+D ++ Y+     Y+E  WW LK+ H+K LL K      + P   T L+ 
Sbjct: 134  EDLTHQMGYWVDMKHPYITYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSS 193

Query: 191  HEVR--GEYKEVLDPSVYVKFKL--------EKSDEYITIWTTTPWTLPSNMLVCVNPEF 240
            HE+   G Y++V D +   +FK+        E    Y   WTTTPWTLPSN  +CV P+ 
Sbjct: 194  HELNQPGCYRDVKDTTAVAQFKMKNPKPEMAEWGTPYFLAWTTTPWTLPSNTALCVGPKI 253

Query: 241  DYAYVNV-EFENGTAETWIIAEKLVN--------DVMKKAEKNND-ISKFSISKVVKGDS 290
            DY  V       G   T ++A+ L+N        D+  +  K  D +  F +    KG  
Sbjct: 254  DYVAVQTYNAYTGEPITVVLAKALLNTHFNSKAADLKLEDYKAGDKLVPFKVVAEYKGAD 313

Query: 291  LIGLKY--IHPLLEENEKQQEFA-KIENV-HTIVPGDHVTLEGGTGLVHTAPGFGEDDFN 346
            LIG++Y  + P ++  E  ++   K+      ++PGD+VT E GTG+VH AP FG DD N
Sbjct: 314  LIGMEYEQLIPWVKPVEVSEDGTWKVSGKGFRVIPGDYVTTEDGTGIVHIAPTFGADDAN 373

Query: 347  IGKEHNIPVYAPIDDNGKYTDSI----------------------------WKGTFVKD- 377
            + +   IP    I+  G+    +                            ++G +VK+ 
Sbjct: 374  VARAAGIPSLFMINKKGETRPMVDLTGKFYMLDELDENFVKECVDVDKYKEYQGAWVKNA 433

Query: 378  ---------------------MDESVIETLISKNLLVNSGKVKHTYPHCWRCKTPLLFRA 416
                                 +D ++   + + N      K  H YPHCWR   P+L+  
Sbjct: 434  YNPVFMVDGKYDEKAAQAAESLDVALCMMMKANNQAFKIEKHIHNYPHCWRTDKPVLYYP 493

Query: 417  TEQWFLSISKIKDSIIEQGKTVDWVPDWVKT-RYVNGVSFVGDWNISRQRYWGIPLPIWI 475
             + WF+  +  K+ ++E  KT++W P+   T R+   +  + DWN+SR RYWG PLPIW 
Sbjct: 494  LDSWFIRSTACKERMMELNKTINWKPESTGTGRFGKWLENLNDWNLSRSRYWGTPLPIWR 553

Query: 476  CEECGNYEVIGSVDEL------------------KERA------NEKDVDLSDIHKPAVD 511
             E+  +   I SV+EL                  K++        E + D  D+H+P VD
Sbjct: 554  TEDGTSEICIESVEELYNEIEKSVAAGFMKSNPYKDKGFVPGEYTEGNYDKIDLHRPYVD 613

Query: 512  KITLTCSCGGKMKRTPDVLDVWYDSGLAPYASI----------GSKKLKKAQFITEGNDQ 561
             I L    G  MKR  D++DVW+DSG  PYA I           ++++  A FI EG DQ
Sbjct: 614  DIILVSEDGQPMKRESDLIDVWFDSGAMPYAQIHYPFENKNILDNREVYPADFIAEGVDQ 673

Query: 562  VTKWFYSQHALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVL 621
               WF++ HA++ +VFD  SY+  + +G  LD+ G KMSK L N V P    E+YG+D L
Sbjct: 674  TRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPL 733

Query: 622  RFYLLSANKAWEDLRFSYSEMDET-RSMLNTLWNSYAFSANYMVLDDF------VPNNEY 674
            R+Y+++ +  W++L+F    ++E  R    TL+N+Y+F A Y  +D F      VP  E 
Sbjct: 734  RWYMITNSSPWDNLKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAER 793

Query: 675  FKHVKDEDAWILSRINTVAKEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWM 734
                 + D WILS +NT+ KE      +         + DF+ ++ S WY++L R R W 
Sbjct: 794  ----PEIDRWILSVLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFWG 849

Query: 735  EKNDVQKLSAYQTLYYVIMKLISIMAPVTPHLSEEIYQNLKTEDMPESIFMNKLT----I 790
             +    KLSAYQTLY  +  +  +MAP++P  ++ +Y +L T    +++    L      
Sbjct: 850  GEFTQDKLSAYQTLYTCLETVAKLMAPISPFYADRLYTDLTTATGRDNVVSIHLAEFPKY 909

Query: 791  ESEFINETLEKDTEIIREIVDSILKGRDKAKYTLRYPITKITLP---ENIAETVEKYGYI 847
            + E I++ LE   ++ +++   +L  R K    +R P+  I +P   E     +E    +
Sbjct: 910  QEEMIDKELEARMQMAQDVTSMVLALRRKVNIKVRQPLQCIMIPVADEEQKAHIEAVKAL 969

Query: 848  IKEQGNVKEIELKEFEGNITVKP---NFKELGKIFRSDVPKVVAAINSVAPNELKEKLKS 904
            I  + NVK+I+  +    + VK    +FK+LG  F   +  V AA+  ++   + E  K+
Sbjct: 970  IMNEVNVKDIKFVDGAAGVLVKKVKCDFKKLGPKFGKQMKAVAAAVAEMSQEAIAELEKN 1029

Query: 905  G----NFEVSEYEIKPEYVE-FRVEIPENIVGVEFSKGNVYINIEMNDEVIKEGLVREVV 959
            G    N + +E  I+   VE F  +IP  +V  E  K  V + + + +E+ +EG+ RE+V
Sbjct: 1030 GKYALNLDGAEAVIEAADVEIFSEDIPGWLVANE-GKLTVALEVTVTEELRREGIARELV 1088

Query: 960  RRIQSMRKDMDLDINEKINVKL----EGIDFSSDYLSHIANEVRGNFVE 1004
             RIQ++RK    +I +KI + +    +  D  ++Y ++I N+V G  ++
Sbjct: 1089 NRIQNIRKSSGFEITDKIKITISKNTQTDDAVNEYNTYICNQVLGTSLD 1137