Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 958 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  157 bits (398), Expect = 3e-42
 Identities = 191/905 (21%), Positives = 357/905 (39%), Gaps = 191/905 (21%)

Query: 5   KSVNFRELDKKVKEYWKKENTYKKVKALNEHGP----EYYFVDGPPYCSGAIHLGTAWNK 60
           K+ + + +++ + + W+++  +K       HG      Y  +  PP  +G++H+G A+  
Sbjct: 3   KTYDPQSIEQTLYQNWEEQGYFKP------HGDASQGNYCIMIPPPNVTGSLHMGHAFQD 56

Query: 61  IIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCK 120
            I DT++R++R++G N L + G D  G+  ++ VE +      K     +G   F+ K  
Sbjct: 57  TIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKS-RHDLGRDAFMEKVW 115

Query: 121 EFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYW 180
           E+     G +  Q   +G  +D+                       ++E  T D      
Sbjct: 116 EWKAQSGGTITKQLRRMGASVDW-----------------------DRERFTMD------ 146

Query: 181 CPRCETSLAEHEVRGEYKEVLDPSVYVKFKLEKSDEYITIWTTTPWTLPSNMLVCVNPEF 240
                             E L  +V   F     D+ I              LV  +P+ 
Sbjct: 147 ------------------EGLSKAVQEVFVRLYEDDLI---------YRGKRLVNWDPKL 179

Query: 241 DYAYVNVEFENGTAE--TWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIGLKYIH 298
             A  ++E EN   +   W +   L +  +    K+      +  + + GDS +    +H
Sbjct: 180 HTAISDLEVENKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVA---VH 236

Query: 299 PLLEENEKQQ----EFAKIENVHTIVP---GDHVTLEGGTGLVHTAPGFGEDDFNIGKEH 351
           P   ++E+ Q    +F  +  V+  +P    D+V +E GTG V   P    +D+ +GK H
Sbjct: 237 P---DDERYQALIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRH 293

Query: 352 NIPVY------APIDDNGKYTDSIWKGTFVKDMDESVIETLI------SKNLLVNS---- 395
            +P++      A I  + +  ++   GT    +D S+ E         +++ +V      
Sbjct: 294 KLPMFNVLTLDAAIRASAEVVNT--DGTINTSLDGSLPERFAGLDRFKARDAIVAEFETL 351

Query: 396 GKVKHTYPHCWRCKTPLLFRA--------TEQWFLSISKIKDSIIE--QGKTVDWVPDWV 445
           G ++   PH    K P   R+        T+QW+++++ +  + IE  +   + +VP   
Sbjct: 352 GLLEKIAPH--GLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQY 409

Query: 446 KTRYVNGVSFVGDWNISRQRYWGIPLPIWICEECGNYEVIGSVDELKERANEKDVDLSDI 505
           +  Y + +  + DW ISRQ +WG  +P W      N +V    +E + RA   ++D    
Sbjct: 410 ENMYFSWMRDIQDWCISRQLWWGHRIPAWYD---ANGKVYVGRNEAEVRAKH-NID---- 461

Query: 506 HKPAVDKITLTCSCGGKMKRTPDVLDVWYDSGLAPYASIG-------SKKLKKAQFITEG 558
                D I L        ++  DVLD W+ S L  ++++G        K       +  G
Sbjct: 462 -----DAIAL--------RQDEDVLDTWFSSALWTFSTLGWPDNVEDLKTFHPTDVLVTG 508

Query: 559 NDQVTKWFYSQHALSAVVFDDTS------YEKCMMHGFTLDETGEKMSKSLGNIVSPDDV 612
            D +  W      ++  +  D        ++   + G   DE G KMSKS GN++ P D+
Sbjct: 509 FDIIFFWVARMIMMTMHLIKDEDGKPQVPFKTVYVTGLIRDEAGNKMSKSKGNVLDPLDM 568

Query: 613 T-------------------------------------EQYGADVLRFYLLSANKAWEDL 635
                                                 E +G D LRF L +      D+
Sbjct: 569 IDGIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHGTDALRFTLAAMASTGRDI 628

Query: 636 RFSYSEMDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDE----DAWILSRINT 691
            +    +D  RS  N LWN+  +        D  PN+  ++  + E    D WI+   N 
Sbjct: 629 NWDMKRLDGYRSFCNKLWNASRYVLMNTEGQDCGPNSPDYQGGEMELSLADRWIIGLFNQ 688

Query: 692 VAKEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYV 751
             K   + +      +    L +F  N F  WY++L +       N+ Q      TL  V
Sbjct: 689 TVKTYDDHMTNYRFDLAANTLYEFTWNQFCDWYLELTKP-VLQNGNEAQMRGTRHTLVNV 747

Query: 752 IMKLISIMAPVTPHLSEEIYQNLK--TEDMPESIFMNKL-TIESEFINETLEKDTEIIRE 808
           +  +  +M P+ P+++E I+Q +K  T    ++I +    + ++  ++ T   D E +++
Sbjct: 748 LEAMQRLMHPMMPYITETIWQRVKPLTGAQGDTIMLAPFPSYDAAKVDATAMADLEWVKQ 807

Query: 809 IVDSI 813
           ++ ++
Sbjct: 808 VIVAV 812