Pairwise Alignments

Query, 213 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 138 a.a., signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 45.8 bits (107), Expect = 4e-10
 Identities = 26/125 (20%), Positives = 67/125 (53%), Gaps = 6/125 (4%)

Query: 1   MKVKSLMDKKFIKIYPDFTVQTVIDLMYKNKKFSTPIVDNDGKMVGWTTAIDLMIVSDKN 60
           +K++  MD++ + +  + ++ T ++ +  N K    +VD++G +VG+ +  D + V  K+
Sbjct: 4   IKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVMLKS 63

Query: 61  IPIKDIMSPIED-----VIVVNKNEPAREAVTKIVEYKVISIPVLNDEGRVVGIVRNCDI 115
               D+ S ++D     V+ V  ++   +   +++  K    PV+ ++G+VVG +   ++
Sbjct: 64  SYHCDMTSVVKDCMRTEVLYVGPDDSILQLAEQMLGSKPKIYPVV-EQGKVVGTINRTNV 122

Query: 116 TKTLS 120
            + ++
Sbjct: 123 LRAMN 127



 Score = 26.2 bits (56), Expect = 3e-04
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 60  NIPIKDIMSPIEDVIVVNKNEPAREAVTKIVEYKVISIPVLNDEGRVVGIVRNCD-ITKT 118
           +I I+D M      +++  N     AV K+++   +   V++D G +VG +   D +   
Sbjct: 3   SIKIRDHMD--RQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVM 60

Query: 119 LSKLYDIPVHSIFKSLM 135
           L   Y   + S+ K  M
Sbjct: 61  LKSSYHCDMTSVVKDCM 77