Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase, chain I from Dechlorosoma suillum PS

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 131 EESCIKCGICERFCPTSAITVE---------KRNSIDINLNLCMGCTACEKVCPKSAIKV 181
           EE CI C +CE  CP  AIT+E         +    DI+L  C+ C  CE+ CP  AI V
Sbjct: 60  EERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI-V 118

Query: 182 ENEMGEITAE 191
           E  + E   E
Sbjct: 119 ETRIFEYHGE 128



 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 199 DTCINCMVCSEICPVGAIVYE-----DGLMK-----LDDKMCIFCGKCEKNCPVTAI 245
           + CI C +C  +CP  AI  E     DG  +     +D   CIFCG CE+ CPV AI
Sbjct: 61  ERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI 117



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 17/78 (21%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+C+ C++C   CP  AI +              E  + D   R  R  ++++D   CI 
Sbjct: 61  ERCIACKLCEAVCPAMAITI--------------EAAQRDDGSR--RTTRYDIDLTKCIF 104

Query: 137 CGICERFCPTSAITVEKR 154
           CG CE  CP  AI VE R
Sbjct: 105 CGFCEEACPVDAI-VETR 121



 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 6/58 (10%)

Query: 164 CMGCTACEKVCPKSAIKVE----NEMGEITAENEISLNNDTCINCMVCSEICPVGAIV 217
           C+ C  CE VCP  AI +E    ++    T   +I L    CI C  C E CPV AIV
Sbjct: 63  CIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTK--CIFCGFCEEACPVDAIV 118



 Score = 37.7 bits (86), Expect = 1e-07
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 47  KCIRCELCYEMCPVDAIKEPSVK--------SPAEILPEKCVKCEICAKTCPVGAI 94
           +CI C+LC  +CP  AI   + +        +  +I   KC+ C  C + CPV AI
Sbjct: 62  RCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI 117



 Score = 33.1 bits (74), Expect = 4e-06
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 43  VESNKCIRCELCYEMCPVDAIKEPSV 68
           ++  KCI C  C E CPVDAI E  +
Sbjct: 97  IDLTKCIFCGFCEEACPVDAIVETRI 122



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 227 DKMCIFCGKCEKNCPVTAIAIK 248
           ++ CI C  CE  CP  AI I+
Sbjct: 60  EERCIACKLCEAVCPAMAITIE 81