Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 57.8 bits (138), Expect = 1e-13
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 12/100 (12%)

Query: 94  INVLEGRAKLEEDNVVYELK-EIDVTHRKIRLVKH-----------ELDEESCIKCGICE 141
           +N+L+ + +  E  ++ EL  +     + I ++K            + D+E CI CG C 
Sbjct: 30  VNILKAKMEPREGFLILELTGDEGQIEKSIEILKKFGEVEDIPKIIQKDDEKCIDCGACV 89

Query: 142 RFCPTSAITVEKRNSIDINLNLCMGCTACEKVCPKSAIKV 181
             CP  A++V++   I ++ + C+GC  C K+CP +AIK+
Sbjct: 90  VHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129



 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 176 KSAIKVENEMGEITAENEISLNNDT-CINCMVCSEICPVGAI-VYEDGLMKLDDKMCIFC 233
           + +I++  + GE+    +I   +D  CI+C  C   CPVGA+ V E+  + LD+  CI C
Sbjct: 56  EKSIEILKKFGEVEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGC 115

Query: 234 GKCEKNCPVTAIAI 247
             C K CPV AI I
Sbjct: 116 KNCAKICPVNAIKI 129



 Score = 48.5 bits (114), Expect = 7e-11
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 11/86 (12%)

Query: 15  ISKNLGIDEKFVKEKLKDLIVPVERNLYVESNKCIRCELCYEMCPVDAIKEPSVKSPAEI 74
           I K++ I +KF +      +  + + +  +  KCI C  C   CPV A+   SV    +I
Sbjct: 55  IEKSIEILKKFGE------VEDIPKIIQKDDEKCIDCGACVVHCPVGAL---SVDEEFKI 105

Query: 75  L--PEKCVKCEICAKTCPVGAINVLE 98
           L   ++C+ C+ CAK CPV AI + E
Sbjct: 106 LLDEDECIGCKNCAKICPVNAIKIFE 131



 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 164 CMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAI 216
           C+ C AC   CP  A+ V+ E        +I L+ D CI C  C++ICPV AI
Sbjct: 82  CIDCGACVVHCPVGALSVDEEF-------KILLDEDECIGCKNCAKICPVNAI 127



 Score = 33.1 bits (74), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 222 LMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250
           +++ DD+ CI CG C  +CPV A+++ ++
Sbjct: 74  IIQKDDEKCIDCGACVVHCPVGALSVDEE 102