Pairwise Alignments
Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 96.3 bits (238), Expect = 9e-25
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 34 IVPVERNLYVESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGA 93
+V + L +KC C + CPV IK+ + P CV CE C CP
Sbjct: 49 LVEKDGKLVFNGSKCDLDGACQKACPV-GIKKVDDRFPYS--KGHCVLCEKCVDICPAEI 105
Query: 94 INVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEK 153
I+ L G+A+ + ++ + I VT + C+ CG+C CP AI++E
Sbjct: 106 IS-LPGKAEKPKKEIIIPQEPIAVT-------------KDCVACGVCVPECPVDAISIED 151
Query: 154 RNSIDINLNLCMGCTACEKVCPKSAIKVENEMGEITAEN--EISLNNDTCINCMVCSEIC 211
ID + C+ CT C + CP +AI V ++ + + ++N + CI C C E C
Sbjct: 152 IAVIDTDK--CIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEAC 209
Query: 212 PVGAIVYEDGLMKLD-DKMCIFCGKCEKNCPVTAIAIK 248
P I Y + + C CG C ++CPV I+++
Sbjct: 210 PGSMIEYNGEALGVKLPGACPACGLCVESCPVEVISLE 247
Score = 94.0 bits (232), Expect = 4e-24
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 36/229 (15%)
Query: 31 KDLIVPVERNLYVESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCP 90
K++I+P E + C+ C +C CPVDAI S++ A I +KC+ C +C++TCP
Sbjct: 117 KEIIIPQEP--IAVTKDCVACGVCVPECPVDAI---SIEDIAVIDTDKCIYCTVCSQTCP 171
Query: 91 VGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAIT 150
AI V KL + R+ + ++EE CI C C CP S I
Sbjct: 172 WNAIFV---AGKLPQ-------------KRQKTIKSFTVNEEECIGCEKCVEACPGSMIE 215
Query: 151 VEKRNSIDINL-NLCMGCTACEKVCPKSAIKVENEMGEITAENEISL--NNDTCINCMVC 207
++ + L C C C + CP I +E E + L + + C C C
Sbjct: 216 Y-NGEALGVKLPGACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPC 274
Query: 208 SEICPVGAI-VYEDGLMKLDDK----------MCIFCGKCEKNCPVTAI 245
+ CP GAI V ++L K MCI CG C CP A+
Sbjct: 275 AIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGAL 323
Score = 92.4 bits (228), Expect = 1e-23
Identities = 66/230 (28%), Positives = 97/230 (42%), Gaps = 65/230 (28%)
Query: 48 CIRCELCYEMCPVDAIKEPS-VKSPAE--ILPEK-------CVKCEICAKTCPVGAINVL 97
C+ CE C ++CP + I P + P + I+P++ CV C +C CPV AI++
Sbjct: 91 CVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISI- 149
Query: 98 EGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITV-----E 152
ED V +D + CI C +C + CP +AI V +
Sbjct: 150 -------EDIAV-------------------IDTDKCIYCTVCSQTCPWNAIFVAGKLPQ 183
Query: 153 KRN----SIDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCS 208
KR S +N C+GC C + CP S I+ E + C C +C
Sbjct: 184 KRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEALGVKLPG-------ACPACGLCV 236
Query: 209 EICPVGAI-----------VYEDGLMKLDDKMCIFCGKCEKNCPVTAIAI 247
E CPV I V ++GL+ ++K C +CG C CP AI +
Sbjct: 237 ESCPVEVISLEVEYASAKPVTDEGLVWSEEK-CAYCGPCAIKCPTGAIKV 285
Score = 87.4 bits (215), Expect = 4e-22
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 43/213 (20%)
Query: 43 VESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEK-CVKCEICAKTCPVGAINVLEGRA 101
++ + C+ C C + CP +AI EI P K C++C CA CP GA+ +G+
Sbjct: 6 IQEDACLVCNACAKACPTEAI---------EIAPFKTCIQCFSCATACPTGALVEKDGK- 55
Query: 102 KLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINL 161
+V+ + D+ G C++ CP V+ R +
Sbjct: 56 ------LVFNGSKCDLD-------------------GACQKACPVGIKKVDDR--FPYSK 88
Query: 162 NLCMGCTACEKVCPKSAI----KVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIV 217
C+ C C +CP I K E EI E C+ C VC CPV AI
Sbjct: 89 GHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS 148
Query: 218 YEDGLMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250
ED + +D CI+C C + CP AI + K
Sbjct: 149 IED-IAVIDTDKCIYCTVCSQTCPWNAIFVAGK 180
Score = 85.9 bits (211), Expect = 1e-21
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 46/248 (18%)
Query: 35 VPVERNLYVESNKCIRCELCYEMCPVDAI---------KEPSVKSPAEILPEKCVKCEIC 85
+ +E ++++KCI C +C + CP +AI ++ ++KS + E+C+ CE C
Sbjct: 147 ISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKS-FTVNEEECIGCEKC 205
Query: 86 AKTCPVGAINVLEGRAK------------LEEDNVVYELKEIDVTHRKIRLVKHE---LD 130
+ CP G++ G A L ++ E+ ++V + + V E
Sbjct: 206 VEACP-GSMIEYNGEALGVKLPGACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWS 264
Query: 131 EESCIKCGICERFCPTSAITVEKRNSIDI----------NLNLCMGCTACEKVCPKSAIK 180
EE C CG C CPT AI V +++ +C+ C AC CP A+K
Sbjct: 265 EEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALK 324
Query: 181 VENEMGEITAENEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLDDKM-----CIFCGK 235
+ + E + + C C C ++CP + + DDKM C+ C K
Sbjct: 325 MGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLE-----LTGDDKMPLKGYCVMCLK 379
Query: 236 CEKNCPVT 243
C + C T
Sbjct: 380 CIEACNKT 387
Score = 62.0 bits (149), Expect = 2e-14
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 157 IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAI 216
I I + C+ C AC K CP AI++ TCI C C+ CP GA+
Sbjct: 4 ISIQEDACLVCNACAKACPTEAIEIAPFK--------------TCIQCFSCATACPTGAL 49
Query: 217 VYEDGLMKLDDKMCIFCGKCEKNCPV 242
V +DG + + C G C+K CPV
Sbjct: 50 VEKDGKLVFNGSKCDLDGACQKACPV 75
Score = 26.9 bits (58), Expect = 6e-04
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 223 MKLDDKMCIFCGKCEKNCPVTAIAI 247
+ + + C+ C C K CP AI I
Sbjct: 4 ISIQEDACLVCNACAKACPTEAIEI 28