Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 92.8 bits (229), Expect = 5e-24
 Identities = 66/208 (31%), Positives = 91/208 (43%), Gaps = 55/208 (26%)

Query: 44  ESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLEGRAKL 103
           E   CI C LC ++CP +AI   SV    +I+   C  C  C   CPV AI         
Sbjct: 42  ELEDCICCGLCVDVCPTNAI---SVFKFRDII---CEHCGACLNVCPVDAI--------- 86

Query: 104 EEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINL-- 161
            E N                  +  +D E CIKCG+C  FC    I + K     +N+  
Sbjct: 87  -EKN------------------RFSVDSEKCIKCGVCSIFC---TIPILKNEIPVLNVPE 124

Query: 162 --NLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIV-- 217
             N C  C  C + CP+ AI  E        + +IS+N+  C  C+ C E CP+ A+   
Sbjct: 125 VTNECNNCKLCIQKCPQKAISFE--------DGKISINSK-CNLCLKCVEFCPLNALKSP 175

Query: 218 ---YEDGLMKLDDKMCIFCGKCEKNCPV 242
               +  ++K+D   CIFC  CE+ CPV
Sbjct: 176 KDSLKSKIIKVDLNSCIFCKDCEEICPV 203



 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 29/136 (21%)

Query: 132 ESCIKCGICERFCPTSAITVEKRNSIDINLNLCMGCTACEKVCPKSAIK-----VENE-- 184
           E CI CG+C   CPT+AI+V K   I     +C  C AC  VCP  AI+     V++E  
Sbjct: 44  EDCICCGLCVDVCPTNAISVFKFRDI-----ICEHCGACLNVCPVDAIEKNRFSVDSEKC 98

Query: 185 ---------------MGEITAENEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLDDKM 229
                            EI   N   + N+ C NC +C + CP  AI +EDG + ++ K 
Sbjct: 99  IKCGVCSIFCTIPILKNEIPVLNVPEVTNE-CNNCKLCIQKCPQKAISFEDGKISINSK- 156

Query: 230 CIFCGKCEKNCPVTAI 245
           C  C KC + CP+ A+
Sbjct: 157 CNLCLKCVEFCPLNAL 172



 Score = 63.2 bits (152), Expect = 4e-15
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 34/145 (23%)

Query: 37  VERNLY-VESNKCIRCELCYEMCPVDAIK-EPSVKSPAEILPEKCVKCEICAKTCPVGAI 94
           +E+N + V+S KCI+C +C   C +  +K E  V +  E+  E C  C++C + CP  AI
Sbjct: 86  IEKNRFSVDSEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTNE-CNNCKLCIQKCPQKAI 144

Query: 95  NVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVE-- 152
           +  +G+  +                              C  C  C  FCP +A+     
Sbjct: 145 SFEDGKISI---------------------------NSKCNLCLKCVEFCPLNALKSPKD 177

Query: 153 --KRNSIDINLNLCMGCTACEKVCP 175
             K   I ++LN C+ C  CE++CP
Sbjct: 178 SLKSKIIKVDLNSCIFCKDCEEICP 202



 Score = 28.9 bits (63), Expect = 9e-05
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 24  KFVKEKLKDLIVPVERNLYVESNKCIRCELCYEMCPV 60
           K  K+ LK  I+ V+ N       CI C+ C E+CPV
Sbjct: 173 KSPKDSLKSKIIKVDLN------SCIFCKDCEEICPV 203



 Score = 26.2 bits (56), Expect = 6e-04
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 216 IVYEDGLMKLDDKMCIFCGKCEKNCPVTAIAI 247
           I+ E    +L+D  CI CG C   CP  AI++
Sbjct: 34  IIGETTNPELED--CICCGLCVDVCPTNAISV 63