Pairwise Alignments
Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 99.0 bits (245), Expect = 1e-25
Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 70/242 (28%)
Query: 40 NLYVESNK----CIRCELCYEMCPVDAIKEPSVKSPAE----------ILPEKCVKCEIC 85
NL +E++K C+ C C E CP D + V PA+ + E CV C +C
Sbjct: 82 NLKIENDKLKGFCVGCMKCVEACPDDYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVC 141
Query: 86 AKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCP 145
CPVGA+++ EG K +D+ SCI C IC + CP
Sbjct: 142 ISECPVGALSI-EGE-------------------------KAVVDKNSCIYCSICAQTCP 175
Query: 146 TSAITVEKRNS---------IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISL 196
+AI V + S ++ +LC+GC C CP+ I V NEM +++
Sbjct: 176 WNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLI-VLNEM--------VAV 226
Query: 197 NNDTCINCMVCSEICPVGAI-----------VYEDGLMKLDDKMCIFCGKCEKNCPVTAI 245
C C +C CPV AI + ++G++ D++ C +CG C CP AI
Sbjct: 227 PPKGCPACGLCMAACPVDAIELVVEYGSPKPITDEGIV-WDEEKCAYCGPCAIKCPNNAI 285
Query: 246 AI 247
+
Sbjct: 286 NV 287
Score = 92.0 bits (227), Expect = 2e-23
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 43 VESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLEGRAK 102
+ + C C+ C CP +A+K +P ++ C C C CP A+N
Sbjct: 4 INTEDCYMCKACENSCPTEALK----LNPFKV----CQLCGNCVNACPNDALN------- 48
Query: 103 LEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINLN 162
L+EI++ + I+ + E C CG C + CP + + +E D
Sbjct: 49 ---------LREIELNGKTIKQI--EYFPTKCDLCGECVKVCPNN-LKIEN----DKLKG 92
Query: 163 LCMGCTACEKVCPKSAIKVENEMG----EITAENEISLNNDTCINCMVCSEICPVGAIVY 218
C+GC C + CP + +E + IT E + C+ C VC CPVGA+
Sbjct: 93 FCVGCMKCVEACPDDYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSI 152
Query: 219 EDGLMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250
E +D CI+C C + CP AI + K
Sbjct: 153 EGEKAVVDKNSCIYCSICAQTCPWNAIFVAGK 184
Score = 84.0 bits (206), Expect = 4e-21
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 35/211 (16%)
Query: 43 VESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLE--GR 100
V+S+ CI C C + CP D I + + P+ C C +C CPV AI ++ G
Sbjct: 198 VDSDLCIGCGDCTDKCPRDLIV---LNEMVAVPPKGCPACGLCMAACPVDAIELVVEYGS 254
Query: 101 AK-LEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDI 159
K + ++ +V+ DEE C CG C CP +AI V +++
Sbjct: 255 PKPITDEGIVW-------------------DEEKCAYCGPCAIKCPNNAINVVNPKGLEM 295
Query: 160 ----------NLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSE 209
+C+ C AC + CP A+++ + + I + + C +C C E
Sbjct: 296 PSRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHDGKEYERIEFSPNLCDSCGKCIE 355
Query: 210 ICPVGAIVYEDGLMKLDDKMCIFCGKCEKNC 240
CP + K + C+ C KC + C
Sbjct: 356 TCPYDMLNLTGKPEKPLEGFCVMCLKCIEAC 386
Score = 74.3 bits (181), Expect = 4e-18
Identities = 60/196 (30%), Positives = 82/196 (41%), Gaps = 39/196 (19%)
Query: 31 KDLIVPVERNLYVESNKCIRCELCYEMCPVDAIK-EPSVKSPAEIL-------PEKCVKC 82
+DLIV + + V C C LC CPVDAI+ SP I EKC C
Sbjct: 215 RDLIV-LNEMVAVPPKGCPACGLCMAACPVDAIELVVEYGSPKPITDEGIVWDEEKCAYC 273
Query: 83 EICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICER 142
CA CP AINV+ K +++ RK +E + CI+CG C +
Sbjct: 274 GPCAIKCPNNAINVVNP-------------KGLEMPSRKKTEKANEF--KMCIRCGACVQ 318
Query: 143 FCPTSAITVEK-------RNSIDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEIS 195
CP A+ + K I+ + NLC C C + CP +M +T + E
Sbjct: 319 SCPNDALRIGKIIHDGKEYERIEFSPNLCDSCGKCIETCP-------YDMLNLTGKPEKP 371
Query: 196 LNNDTCINCMVCSEIC 211
L C+ C+ C E C
Sbjct: 372 LEG-FCVMCLKCIEAC 386
Score = 40.0 bits (92), Expect = 7e-08
Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 27/108 (25%)
Query: 157 IDINLNLCMGCTACEKVCPKSAIK-------------VENEMGEITAENEISLNNDT--- 200
I IN C C ACE CP A+K V + EI LN T
Sbjct: 2 IKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNACPNDALNLREIELNGKTIKQ 61
Query: 201 -------CINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCGKCEKNCP 241
C C C ++CP + D L C+ C KC + CP
Sbjct: 62 IEYFPTKCDLCGECVKVCPNNLKIENDKL----KGFCVGCMKCVEACP 105
Score = 27.3 bits (59), Expect = 5e-04
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 222 LMKLDDKMCIFCGKCEKNCPVTAIAI 247
++K++ + C C CE +CP A+ +
Sbjct: 1 MIKINTEDCYMCKACENSCPTEALKL 26