Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 251 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 52.8 bits (125), Expect = 7e-12
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 145 PTSAITVEKRNSIDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDT---- 200
           P    T  KR  + I+L  C+GC AC   C    +    +      + E+S  +      
Sbjct: 31  PAQTATTSKRYGMVIDLRRCVGCQACTVACTFENLPPLGQFRTTVQQYEVSQQDSATPPA 90

Query: 201 -------CINC--MVCSEICPVGAIVYE-DGLMKLDDKMCIFCGKCEKNCPVTA 244
                  C +C    C  ICP GA     DG++ ++++ C+ CG C + CP  A
Sbjct: 91  FLMLPRLCNHCENPPCIPICPTGATFQRPDGIVVVNNEWCVGCGYCVQACPYDA 144



 Score = 36.6 bits (83), Expect = 5e-07
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 17/113 (15%)

Query: 78  KCVKCEICAKTCPVGAINVL-EGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           +CV C+ C   C    +  L + R  +++    YE+ + D       L+   L       
Sbjct: 49  RCVGCQACTVACTFENLPPLGQFRTTVQQ----YEVSQQDSATPPAFLMLPRL------- 97

Query: 137 CGICER-----FCPTSAITVEKRNSIDINLNLCMGCTACEKVCPKSAIKVENE 184
           C  CE       CPT A        + +N   C+GC  C + CP  A  + +E
Sbjct: 98  CNHCENPPCIPICPTGATFQRPDGIVVVNNEWCVGCGYCVQACPYDARFINHE 150



 Score = 25.8 bits (55), Expect = 9e-04
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 9/51 (17%)

Query: 48  CIRCEL--CYEMCPVDAIKEPSVKSPAEILP---EKCVKCEICAKTCPVGA 93
           C  CE   C  +CP  A    + + P  I+    E CV C  C + CP  A
Sbjct: 98  CNHCENPPCIPICPTGA----TFQRPDGIVVVNNEWCVGCGYCVQACPYDA 144