Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 230 a.a., NrfC, Fe-S-cluster-containing hydrogenase component 1 (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.9 bits (115), Expect = 6e-11
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 64  DNKCVYCNTCVETC-PVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLV--C 120
           +N C+ CN CV+ C   + I    TRV++E      E   +S +  ++R  C  C    C
Sbjct: 50  ENACIGCNACVQACRETNQIPEGVTRVKIERRGPFGEYPNQSYR--FSRVSCQHCEAAPC 107

Query: 121 TKNCPFEA--ISESDDTISFNMDKCVLCGHCEEICP 154
            + CP  A  I +    ++ N D+CV C +C   CP
Sbjct: 108 VRVCPTGAAYIDKETGIVAVNSDRCVGCQYCIAACP 143



 Score = 42.4 bits (98), Expect = 5e-09
 Identities = 40/150 (26%), Positives = 54/150 (36%), Gaps = 47/150 (31%)

Query: 38  CILCNRCLEVCP--------VTAISSN----FPEVPDIDNK-----CVYCNT--CVETCP 78
           CI CN C++ C         VT +       F E P+   +     C +C    CV  CP
Sbjct: 53  CIGCNACVQACRETNQIPEGVTRVKIERRGPFGEYPNQSYRFSRVSCQHCEAAPCVRVCP 112

Query: 79  VDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISF 138
             A  I K     E G + +           N  +CV C  C   CP++      +T + 
Sbjct: 113 TGAAYIDK-----ETGIVAV-----------NSDRCVGCQYCIAACPYQVRYIHPETRT- 155

Query: 139 NMDKCVLCGH----------CEEICPAKAI 158
             DKC  C            C E CP KA+
Sbjct: 156 -ADKCDFCQKSRLAQGLQPACVEACPTKAL 184