Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 462 a.a., Ferredoxin hydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score = 49.3 bits (116), Expect = 9e-11
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 27 ISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDID-NKCVYCNTCVETC 77
          I   + I+PE+C  C RC+E CPV AI+ +  +  +I+   CV C  CV TC
Sbjct: 3  IQPTVTIDPELCTGCGRCVETCPVQAIAGSRGKAHEIEAAACVSCGRCVATC 54



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 114 CVMCLVCTKNCPFEAISESDDTI-SFNMDKCVLCGHCEEICPA 155
           C  C  C + CP +AI+ S           CV CG C   C A
Sbjct: 14  CTGCGRCVETCPVQAIAGSRGKAHEIEAAACVSCGRCVATCAA 56



 Score = 30.4 bits (67), Expect = 4e-05
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 18/70 (25%)

Query: 67  CVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNC-P 125
           C  C  CVETCPV AI  +                 + K  +     CV C  C   C  
Sbjct: 14  CTGCGRCVETCPVQAIAGS-----------------RGKAHEIEAAACVSCGRCVATCAA 56

Query: 126 FEAISESDDT 135
           F++I ++  T
Sbjct: 57  FDSIFDAFPT 66



 Score = 29.3 bits (64), Expect = 9e-05
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 135 TISFNMDKCVLCGHCEEICPAKAI 158
           T++ + + C  CG C E CP +AI
Sbjct: 6   TVTIDPELCTGCGRCVETCPVQAI 29