Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 649 a.a., hypothetical protein from Phaeobacter inhibens DSM 17395

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 114 CVMCLVCTKNCPFEAISESDDT--ISFNMDKCVLCGHCEEICPAKAIKLE 161
           C +CL C   CP  A+ ++ D   + F  D C+ CG C  ICP  AI  E
Sbjct: 501 CTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITYE 550



 Score = 43.5 bits (101), Expect = 7e-09
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 33  INPEICILCNRCLEVCPVTAISSNFPEVPDI---DNKCVYCNTCVETCPVDAI 82
           ++ + C LC  C+ +CP  A+  N P++P +   ++ C+ C  C   CP DAI
Sbjct: 496 VSSDNCTLCLSCVSLCPSGALGDN-PDLPQLRFQEDACLQCGLCATICPEDAI 547



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 117 CLVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAI 158
           C  C   CP  AIS + D +S +   C  CG C  +CP+ AI
Sbjct: 278 CTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 319



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 41  CNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAI 82
           C RCL++CP  AIS     V      C  C +C   CP  AI
Sbjct: 278 CTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 319



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 31  IEINPEICILCNRCLEVCPVTAISSNFP 58
           + I+P IC  C  C  +CP  AI+ + P
Sbjct: 297 VSIDPMICAGCGSCASLCPSGAITYDAP 324



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 141 DKCVLCGHCEEICPAKAI 158
           D C LC  C  +CP+ A+
Sbjct: 499 DNCTLCLSCVSLCPSGAL 516