Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 558 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.7 bits (117), Expect = 8e-11
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 106 KLDYNRKKCVMCLVCTKNCPFEAISESDD--TISFNMDKCVLCGHCEEICPAKAIKL 160
           K+  N   C +CL C   CP +A+++  +   + F    CV CG CE  CP K I L
Sbjct: 420 KVSVNTDNCTLCLSCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVISL 476



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 30  KIEINPEICILCNRCLEVCPVTAIS--SNFPEVPDIDNKCVYCNTCVETCPVDAIKIT 85
           K+ +N + C LC  C+  CP  A++     P +  ++  CV C  C   CP   I +T
Sbjct: 420 KVSVNTDNCTLCLSCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVISLT 477



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 31  IEINPEICIL-------CNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAI 82
           +++N +IC         C+RCL  CP  AI+S   ++      C    +C   CP  AI
Sbjct: 183 VKVNSDICAHHRNGIDGCSRCLNFCPADAIASVDHKIEIDPYLCHGAGSCTNACPTGAI 241



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 15/45 (33%), Positives = 19/45 (42%)

Query: 117 CLVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161
           C  C   CP +AI+  D  I  +   C   G C   CP  AI  +
Sbjct: 200 CSRCLNFCPADAIASVDHKIEIDPYLCHGAGSCTNACPTGAISYD 244



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 27  ISNKIEINPEICILCNRCLEVCPVTAISSNFP 58
           + +KIEI+P +C     C   CP  AIS + P
Sbjct: 215 VDHKIEIDPYLCHGAGSCTNACPTGAISYDLP 246



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 70  CNTCVETCPVDAIKITKTRVRVE 92
           C+ C+  CP DAI     ++ ++
Sbjct: 200 CSRCLNFCPADAIASVDHKIEID 222