Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 656 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 23/135 (17%)

Query: 38  CILCNRCLEVCPVTAISSNF----------PEVPDIDNKC-VYCNTCVETCPVDAIK-IT 85
           C+ C  C   CP   +   +          P V      C   C+ C   CP  AI+ + 
Sbjct: 423 CVRCGLCAAACPTNTLQPAWLASGALGMFSPVVTPARGFCDPACHACARACPTTAIRRLA 482

Query: 86  KTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAIS---ESDDTISF---N 139
             R   + G   +   L+   L + +KK   CLVC + CP++AI+   E   T+     +
Sbjct: 483 DERTFAKIGTAEV---LRDHCLAWAKKK--RCLVCDEVCPYDAIALKPEPGYTVGVPHVD 537

Query: 140 MDKCVLCGHCEEICP 154
             +C  CG CE+ CP
Sbjct: 538 PARCAGCGFCEKHCP 552



 Score = 41.2 bits (95), Expect = 3e-08
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 38  CILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIK 83
           C  C  C   CP  AI +  P   D   +C+ C  C + CPVDA++
Sbjct: 254 CTACGACARRCPAGAIPAAAPRATD-HAECLKCLRCADVCPVDAVR 298



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 23/116 (19%)

Query: 61  PDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKC-VMCLV 119
           PD   +CV C  C   CP + ++       + +G L     + S  +   R  C   C  
Sbjct: 417 PDFLARCVRCGLCAAACPTNTLQ----PAWLASGAL----GMFSPVVTPARGFCDPACHA 468

Query: 120 CTKNCPFEAISESDDTISFN--------MDKCVL------CGHCEEICPAKAIKLE 161
           C + CP  AI    D  +F          D C+       C  C+E+CP  AI L+
Sbjct: 469 CARACPTTAIRRLADERTFAKIGTAEVLRDHCLAWAKKKRCLVCDEVCPYDAIALK 524



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 114 CVMCLVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIK 159
           C  C  C + CP  AI  +    + + + C+ C  C ++CP  A++
Sbjct: 254 CTACGACARRCPAGAIPAAAPRATDHAE-CLKCLRCADVCPVDAVR 298



 Score = 33.5 bits (75), Expect = 7e-06
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 38  CILCNRCLEVCPVTAISSNFPEVPDI 63
           C+ C RC +VCPV A+   F +VP +
Sbjct: 282 CLKCLRCADVCPVDAVRFAFSDVPGV 307



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 19/67 (28%)

Query: 63  IDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTK 122
           +++ C  C  C   CP  AI     R                     +  +C+ CL C  
Sbjct: 250 VEHACTACGACARRCPAGAIPAAAPRAT-------------------DHAECLKCLRCAD 290

Query: 123 NCPFEAI 129
            CP +A+
Sbjct: 291 VCPVDAV 297