Pairwise Alignments
Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 76.6 bits (187), Expect = 4e-19
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 35 PEICILCNRCLEVCPVTAISSNF-----PEVPDID-NKCVYCNTCVETCPVDAIKITKTR 88
PE CI C+ C E CP AIS F E+P D C+ C CVE+CP + +++ R
Sbjct: 46 PEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLR 105
Query: 89 VRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTI-SFNMDKCVLCG 147
+ ++ N K L + + CV C C CP +AIS ++ + +++ CV C
Sbjct: 106 KEAKE---LLWNVPKIINLLIDEEICVSCGTCENACPVDAISHNNTGLYEIDVNICVSCK 162
Query: 148 HCEEICPAK 156
+C ++CP +
Sbjct: 163 NCLKVCPVE 171
Score = 66.6 bits (161), Expect = 4e-16
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 33 INPEICILCNRCLEVCPVTAISSNFPEVPDID-NKCVYCNTCVETCPVDAIKITKTRVRV 91
I+ EIC+ C C CPV AIS N + +ID N CV C C++ CPV+ +T +
Sbjct: 123 IDEEICVSCGTCENACPVDAISHNNTGLYEIDVNICVSCKNCLKVCPVENAIVTYDEPGL 182
Query: 92 ENGNLIIEN-RLKSKKLDYNRKK---------------CVMCLVCTKNCPFEAISESDDT 135
I +N + ++L + K+ C+ C C CP S D
Sbjct: 183 SEKIEIAQNTKFDRERLGSDFKEESDVIAEIPRIVPSLCIGCGNCVDVCP-----GSIDL 237
Query: 136 ISFNMDKCVLCGHCEEICPAKAIKL 160
+ C+ G C E+CP AI++
Sbjct: 238 ERLKVTSCIKSGKCLEVCPTTAIRI 262
Score = 63.2 bits (152), Expect = 5e-15
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 14 DNLDINFELDSQYISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTC 73
+ L +F+ +S I+ I P +CI C C++VCP + C+ C
Sbjct: 197 ERLGSDFKEESDVIAEIPRIVPSLCIGCGNCVDVCPGSIDLERLKV-----TSCIKSGKC 251
Query: 74 VETCPVDAIKI-TKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPF-EAISE 131
+E CP AI+I ++ I + +KC+ C +C + C EAI
Sbjct: 252 LEVCPTTAIRIGVPEKITKRTAECYI----------VDEEKCIGCRICYRACNVPEAILI 301
Query: 132 SDDT--ISFNMDKCVLCGHCEEICPAKAI 158
S +T N + CV CG C+ CP AI
Sbjct: 302 SKETNLPYINPEYCVRCGLCQNACPVDAI 330
Score = 52.8 bits (125), Expect = 7e-12
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 58 PEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMC 117
P + D+ KC+ C+ C E+CP DAI ++ K + ++ C+ C
Sbjct: 40 PVIFDLPEKCISCSACKESCPSDAI------------SMEFNEEFKKEMPVFDAGSCINC 87
Query: 118 LVCTKNCPFEAIS-----ESDDTISFNMDK----------CVLCGHCEEICPAKAI 158
C ++CP + + + +N+ K CV CG CE CP AI
Sbjct: 88 GNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAI 143
Score = 50.8 bits (120), Expect = 3e-11
Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 67/193 (34%)
Query: 18 INFELDSQYISNKIEINPEICILCNRCLEVCPVTAISS------------NFPEVPDI-- 63
I+ E + ++ + CI C C+E CP + N P++ ++
Sbjct: 64 ISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLI 123
Query: 64 -DNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTK 122
+ CV C TC CPVDAI T + + N+ CV C C K
Sbjct: 124 DEEICVSCGTCENACPVDAISHNNTGLYEIDVNI-----------------CVSCKNCLK 166
Query: 123 NCPFE-AISESDD-----------TISFNMDK----------------------CVLCGH 148
CP E AI D+ F+ ++ C+ CG+
Sbjct: 167 VCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKEESDVIAEIPRIVPSLCIGCGN 226
Query: 149 CEEICPAKAIKLE 161
C ++CP +I LE
Sbjct: 227 CVDVCPG-SIDLE 238
Score = 43.1 bits (100), Expect = 5e-09
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 112 KKCVMCLVCTKNCPFEAIS-ESDDTIS-----FNMDKCVLCGHCEEICPAKAIKL 160
+KC+ C C ++CP +AIS E ++ F+ C+ CG+C E CP +++
Sbjct: 47 EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
Score = 40.0 bits (92), Expect = 4e-08
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 33 INPEICILCNRCLEVC--PVTAISSNFPEVPDIDNK-CVYCNTCVETCPVDAIKITKT 87
++ E CI C C C P + S +P I+ + CV C C CPVDAI KT
Sbjct: 278 VDEEKCIGCRICYRACNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAIDYLKT 335
Score = 30.8 bits (68), Expect = 3e-05
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 141 DKCVLCGHCEEICPAKAIKLE 161
+KC+ C C+E CP+ AI +E
Sbjct: 47 EKCISCSACKESCPSDAISME 67