Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 60.5 bits (145), Expect = 1e-14
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)

Query: 30  KIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCN--TCVETCPVDAIKITKT 87
           K+  N ++C+ C +C   CP+ AI   F  +P    +C++C    C+  CP DAI+    
Sbjct: 2   KVMPNIDLCVDCKKCERACPINAIHV-FDGIP---IRCMHCEDAPCLNVCPEDAIEKIAD 57

Query: 88  RVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDT-ISFNMDKCVLC 146
           +V V                  + +KCV C +C + CP  AI     T ++   D C+  
Sbjct: 58  KVVV------------------HPEKCVGCALCAEVCPVGAIQIDRCTKVAVKCDGCIER 99

Query: 147 GH--CEEICPAKAI 158
           G   C E+CP KA+
Sbjct: 100 GSEVCLEVCPTKAL 113



 Score = 50.4 bits (119), Expect = 1e-11
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 25/104 (24%)

Query: 60  VPDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMC-- 117
           +P+ID  CV C  C   CP++AI +                       D    +C+ C  
Sbjct: 4   MPNID-LCVDCKKCERACPINAIHV----------------------FDGIPIRCMHCED 40

Query: 118 LVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161
             C   CP +AI +  D +  + +KCV C  C E+CP  AI+++
Sbjct: 41  APCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQID 84



 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 35  PEICILCNR--CLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKI---TKTRV 89
           P  C+ C    CL VCP  AI     +V     KCV C  C E CPV AI+I   TK  V
Sbjct: 32  PIRCMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAV 91

Query: 90  R----VENGNLIIENRLKSKKLDY 109
           +    +E G+ +      +K LDY
Sbjct: 92  KCDGCIERGSEVCLEVCPTKALDY 115



 Score = 45.4 bits (106), Expect = 4e-10
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 27  ISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYC-----NTCVETCPVDA 81
           I++K+ ++PE C+ C  C EVCPV AI         +  KC  C       C+E CP  A
Sbjct: 55  IADKVVVHPEKCVGCALCAEVCPVGAI--QIDRCTKVAVKCDGCIERGSEVCLEVCPTKA 112

Query: 82  IKITKTRVRVENGNLIIE-NRLKSKK 106
           +   +  +  +   L+ +  +L S+K
Sbjct: 113 LDYYENTIENKRAELVSKLKKLTSRK 138