Pairwise Alignments
Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 76.6 bits (187), Expect = 5e-19
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 25 QYISNKIEINPEICILCNRCLEVCP--VTAISSNFPEVPDIDNKCVYCNTCVETCPVDAI 82
++ + KI +P+ C LCN C++ CP V F +D CV C C++ CP DAI
Sbjct: 282 RFENGKILYDPKTCTLCNTCVKECPQGVRINKGGF-----VDGGCVLCEVCIKECPEDAI 336
Query: 83 KITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFN--- 139
I + +SK ++K+C+ C C+ CP +AI+ D+++F+
Sbjct: 337 SIKE----------------RSKFTSIDKKECIACGTCSMVCPNDAITVKIDSLNFSGNK 380
Query: 140 -------MDKCVLCGHCEEICPAKAIK 159
D CVLC C CP I+
Sbjct: 381 VHSEVIFNDNCVLCEKCAIHCPRDVIE 407
Score = 72.8 bits (177), Expect = 8e-18
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Query: 31 IEINPEI-CILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRV 89
++ NPE CI C C++ CP A+ ++ C CNTCV+ CP V
Sbjct: 258 VKANPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECP--------QGV 309
Query: 90 RVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAIS--ESDDTISFNMDKCVLCG 147
R+ G + CV+C VC K CP +AIS E S + +C+ CG
Sbjct: 310 RINKGGFVDGG-------------CVLCEVCIKECPEDAISIKERSKFTSIDKKECIACG 356
Query: 148 HCEEICPAKAIKLE 161
C +CP AI ++
Sbjct: 357 TCSMVCPNDAITVK 370
Score = 70.5 bits (171), Expect = 4e-17
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 27 ISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITK 86
+ + I I+ E C+ C +C+ VCP I +I + C CN C E CPVDAIK +
Sbjct: 170 LRHSISIDSEKCVECGKCIYVCPKDTIIE-----AEIVDGCTRCNICNEVCPVDAIKYGE 224
Query: 87 -TRVRVENGNL----------IIENRLKSKKLDYN---RKKCVMCLVCTKNCPFEAISES 132
T + GN I E ++ K D K C+ C +C CP A+
Sbjct: 225 VTENCILCGNCISKCPKDALEISEFKVVKTKEDVKANPEKHCINCGLCVDKCPSNALRFE 284
Query: 133 DDTISFNMDKCVLCGHCEEICP 154
+ I ++ C LC C + CP
Sbjct: 285 NGKILYDPKTCTLCNTCVKECP 306
Score = 65.1 bits (157), Expect = 2e-15
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 37/156 (23%)
Query: 38 CILCNRCLEVCPVTAIS-SNFPEVPDIDNK-CVYCNTCVETCPVDAIKI-------TKTR 88
C+LC C++ CP AIS + ID K C+ C TC CP DAI + + +
Sbjct: 321 CVLCEVCIKECPEDAISIKERSKFTSIDKKECIACGTCSMVCPNDAITVKIDSLNFSGNK 380
Query: 89 VRVE---NGNLI-------------IENRLKSKKL-----DYNRKK---CVMCLVCTKNC 124
V E N N + IEN KK+ Y R CV C +CT C
Sbjct: 381 VHSEVIFNDNCVLCEKCAIHCPRDVIENTSGYKKVVDPENSYIRVDDGYCVKCGLCTIIC 440
Query: 125 PFEAISESDDTISFNMDKCVLCGHCEEICPAKAIKL 160
P +AI + + T ++C C C ICP +AI++
Sbjct: 441 PNDAIDKGEITT----ERCEYCSACVNICPTRAIRI 472
Score = 58.2 bits (139), Expect = 2e-13
Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 35/157 (22%)
Query: 33 INPEICILCNRCLEVCPVTAISSNFPEVPDI--DNKCVYCNTCVETCPVDA--------I 82
+N ++C C C CP+ I CV C C CP +A +
Sbjct: 70 VNRKLCTGCGICKNACPIDIIDIREDSTGKAYPTGMCVMCGLCTTECPYNARLYFDPSSL 129
Query: 83 KITKTRVRVENGNLIIE--------------------NRLKSKKLDYNRKKCVMCLVCTK 122
K TK ++ +E + I + R+ + + +KCV C C
Sbjct: 130 KNTKNKMLMERYSTIFKMMGKTYEFPEQKHVKIVKPTERMLRHSISIDSEKCVECGKCIY 189
Query: 123 NCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIK 159
CP + I E++ +D C C C E+CP AIK
Sbjct: 190 VCPKDTIIEAEI-----VDGCTRCNICNEVCPVDAIK 221
Score = 54.3 bits (129), Expect = 3e-12
Identities = 47/180 (26%), Positives = 60/180 (33%), Gaps = 70/180 (38%)
Query: 42 NRCLEVCPVTAISSNFPEVPDIDNK---CVYCNTCVETCPVDAIKITKTRVRVENGNL-- 96
++C+EVCP AI ID K C+ C TC + CP AIK + N L
Sbjct: 24 SKCMEVCPTNAIKM-------IDGKAFSCITCGTCAKECPTGAIKKNEYGGYYVNRKLCT 76
Query: 97 ------------IIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESD----------- 133
II+ R S Y CVMC +CT CP+ A D
Sbjct: 77 GCGICKNACPIDIIDIREDSTGKAYPTGMCVMCGLCTTECPYNARLYFDPSSLKNTKNKM 136
Query: 134 -----------------------------------DTISFNMDKCVLCGHCEEICPAKAI 158
+IS + +KCV CG C +CP I
Sbjct: 137 LMERYSTIFKMMGKTYEFPEQKHVKIVKPTERMLRHSISIDSEKCVECGKCIYVCPKDTI 196
Score = 43.1 bits (100), Expect = 6e-09
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 31 IEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKT 87
I ++ C+ C C +CP AI E+ +C YC+ CV CP AI+I +T
Sbjct: 423 IRVDDGYCVKCGLCTIICPNDAIDKG--EITT--ERCEYCSACVNICPTRAIRIYRT 475
Score = 41.2 bits (95), Expect = 2e-08
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 23/89 (25%)
Query: 73 CVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISES 132
C+E CP +AIK+ +D C+ C C K CP AI ++
Sbjct: 26 CMEVCPTNAIKM----------------------IDGKAFSCITCGTCAKECPTGAIKKN 63
Query: 133 D-DTISFNMDKCVLCGHCEEICPAKAIKL 160
+ N C CG C+ CP I +
Sbjct: 64 EYGGYYVNRKLCTGCGICKNACPIDIIDI 92
Score = 28.5 bits (62), Expect = 2e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 29 NKIEINPEICILCNRCLEVCPVTAI 53
+K EI E C C+ C+ +CP AI
Sbjct: 446 DKGEITTERCEYCSACVNICPTRAI 470