Pairwise Alignments
Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 78.6 bits (192), Expect = 1e-19
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 38 CILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLI 97
C+ C C+ CPV AIS V D D KC+YC C +TCP +AI + G L
Sbjct: 132 CVACGVCVPECPVDAISIEDIAVIDTD-KCIYCTVCSQTCPWNAIFVA--------GKLP 182
Query: 98 IENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMD-KCVLCGHCEEICPAK 156
+ + K N ++C+ C C + CP I + + + + C CG C E CP +
Sbjct: 183 QKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEALGVKLPGACPACGLCVESCPVE 242
Query: 157 AIKLE 161
I LE
Sbjct: 243 VISLE 247
Score = 71.2 bits (173), Expect = 2e-17
Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 31 IEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVR 90
I I + C++CN C + CP AI E+ C+ C +C CP A+
Sbjct: 4 ISIQEDACLVCNACAKACPTEAI-----EIAPF-KTCIQCFSCATACPTGAL-------- 49
Query: 91 VENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMDKCVLCGHCE 150
VE K KL +N KC + C K CP I + DD ++ CVLC C
Sbjct: 50 VE----------KDGKLVFNGSKCDLDGACQKACPV-GIKKVDDRFPYSKGHCVLCEKCV 98
Query: 151 EICPAKAIKL 160
+ICPA+ I L
Sbjct: 99 DICPAEIISL 108
Score = 70.1 bits (170), Expect = 4e-17
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 41/144 (28%)
Query: 38 CILCNRCLEVCPVTAISSN-----------FPEVP-DIDNKCVYCNTCVETCPVDAIKIT 85
C+LC +C+++CP IS P+ P + CV C CV CPVDAI I
Sbjct: 91 CVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE 150
Query: 86 KTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI----------SESDDT 135
V + KC+ C VC++ CP+ AI ++ +
Sbjct: 151 DIAV-------------------IDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKS 191
Query: 136 ISFNMDKCVLCGHCEEICPAKAIK 159
+ N ++C+ C C E CP I+
Sbjct: 192 FTVNEEECIGCEKCVEACPGSMIE 215
Score = 65.1 bits (157), Expect = 1e-15
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 35 PEICILCNRCLEVCPVTAIS-----SNFPEVPD-----IDNKCVYCNTCVETCPVDAIKI 84
P C C C+E CPV IS ++ V D + KC YC C CP AIK+
Sbjct: 226 PGACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKV 285
Query: 85 TKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI--------SESDDTI 136
+ L + ++ K++K + C+ C C CP A+ + +
Sbjct: 286 VNPK------GLELPSKKKTEKAN-EFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARV 338
Query: 137 SFNMDKCVLCGHCEEICPAKAIKL 160
F+ C CG C ++CP K ++L
Sbjct: 339 EFSPALCNECGECVDVCPQKTLEL 362
Score = 63.5 bits (153), Expect = 4e-15
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 33 INPEICILCNRCLEVCPVTAISSNFPEV-PDIDNKCVYCNTCVETCPVDAIKITKTRVRV 91
+N E CI C +C+E CP + I N + + C C CVE+CPV+ I + V
Sbjct: 194 VNEEECIGCEKCVEACPGSMIEYNGEALGVKLPGACPACGLCVESCPVEVISL-----EV 248
Query: 92 ENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI-----------SESDDTISFNM 140
E + + + L ++ +KC C C CP AI S+ +
Sbjct: 249 EYAS---AKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEF 305
Query: 141 DKCVLCGHCEEICPAKAIKL 160
C+ CG C CP A+K+
Sbjct: 306 AMCIRCGACAMKCPTGALKM 325
Score = 60.8 bits (146), Expect = 2e-14
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 36/157 (22%)
Query: 31 IEINP-EICILCNRCLEVCPVTAISSNFPE---------------------VPDIDNK-- 66
IEI P + CI C C CP A+ + + +D++
Sbjct: 26 IEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFP 85
Query: 67 -----CVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCT 121
CV C CV+ CP + I + + + +I + + K CV C VC
Sbjct: 86 YSKGHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAV------TKDCVACGVCV 139
Query: 122 KNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAI 158
CP +AIS D + + DKC+ C C + CP AI
Sbjct: 140 PECPVDAISIEDIAV-IDTDKCIYCTVCSQTCPWNAI 175
Score = 57.4 bits (137), Expect = 3e-13
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 37/159 (23%)
Query: 22 LDSQYISNKIEINPEICILCNRCLEVCPVTAI--SSNFPEVPD--------IDNKCVYCN 71
+D+ I + I+ + CI C C + CP AI + P+ + +C+ C
Sbjct: 144 VDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCE 203
Query: 72 TCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAIS- 130
CVE CP I+ NG + KL C C +C ++CP E IS
Sbjct: 204 KCVEACPGSMIEY--------NGEAL------GVKLP---GACPACGLCVESCPVEVISL 246
Query: 131 ---------ESDDTISFNMDKCVLCGHCEEICPAKAIKL 160
+D+ + ++ +KC CG C CP AIK+
Sbjct: 247 EVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKV 285
Score = 41.2 bits (95), Expect = 2e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 30 KIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETC 77
++E +P +C C C++VCP + + + CV C C+E C
Sbjct: 337 RVEFSPALCNECGECVDVCPQKTLELTGDDKMPLKGYCVMCLKCIEAC 384
Score = 35.0 bits (79), Expect = 1e-06
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 26/96 (27%)
Query: 37 ICILCNRCLEVCPVTAIS--------SNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTR 88
+CI C C CP A+ + V C C CV+ CP +++T
Sbjct: 307 MCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTG-- 364
Query: 89 VRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNC 124
++++ K CVMCL C + C
Sbjct: 365 ----------DDKMPLKGY------CVMCLKCIEAC 384
Score = 23.1 bits (48), Expect = 0.006
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 38 CILCNRCLEVCPVT 51
C++C +C+E C T
Sbjct: 374 CVMCLKCIEACNKT 387