Pairwise Alignments
Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 70.5 bits (171), Expect = 3e-17
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 36 EICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGN 95
E C+ C C+ CPV A+S + N C+YC+ C +TCP +AI + + + N
Sbjct: 133 EDCVGCGVCISECPVGALSIEGEKAVVDKNSCIYCSICAQTCPWNAIFVAGKKSPKRDKN 192
Query: 96 LIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPA 155
++ K + C+ C CT CP + I ++ ++ C CG C CP
Sbjct: 193 IV--------KFSVDSDLCIGCGDCTDKCPRDLI-VLNEMVAVPPKGCPACGLCMAACPV 243
Query: 156 KAIKL 160
AI+L
Sbjct: 244 DAIEL 248
Score = 69.3 bits (168), Expect = 7e-17
Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 31 IEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVR 90
I+IN E C +C C CP A+ N +V C C CV CP DA+ + + +
Sbjct: 2 IKINTEDCYMCKACENSCPTEALKLNPFKV------CQLCGNCVNACPNDALNLREIEL- 54
Query: 91 VENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMDKCVLCGHCE 150
NG I K+++Y KC +C C K CP E+D F CV C C
Sbjct: 55 --NGKTI-------KQIEYFPTKCDLCGECVKVCPNNLKIENDKLKGF----CVGCMKCV 101
Query: 151 EICPAKAIKLE 161
E CP + +E
Sbjct: 102 EACPDDYVGME 112
Score = 66.2 bits (160), Expect = 6e-16
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 27 ISNKIEINPEICILCNRCLEVCPVTAIS------SNFPEVPD----IDNKCVYCNTCVET 76
++ + + P+ C C C+ CPV AI S P + + KC YC C
Sbjct: 220 LNEMVAVPPKGCPACGLCMAACPVDAIELVVEYGSPKPITDEGIVWDEEKCAYCGPCAIK 279
Query: 77 CPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI------- 129
CP +AI + + L + +R K++K + K C+ C C ++CP +A+
Sbjct: 280 CPNNAINVVNPK------GLEMPSRKKTEKAN-EFKMCIRCGACVQSCPNDALRIGKIIH 332
Query: 130 -SESDDTISFNMDKCVLCGHCEEICPAKAIKL 160
+ + I F+ + C CG C E CP + L
Sbjct: 333 DGKEYERIEFSPNLCDSCGKCIETCPYDMLNL 364
Score = 63.5 bits (153), Expect = 4e-15
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 21 ELDSQYISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVD 80
EL+ + I +IE P C LC C++VCP N + CV C CVE CP D
Sbjct: 53 ELNGKTIK-QIEYFPTKCDLCGECVKVCPNNLKIEN----DKLKGFCVGCMKCVEACPDD 107
Query: 81 AIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNM 140
+ + V N+ + + D CV C VC CP A+S + +
Sbjct: 108 YVGMEGV-VEPAKRNITLPKEPIAVTED-----CVGCGVCISECPVGALSIEGEKAVVDK 161
Query: 141 DKCVLCGHCEEICPAKAI 158
+ C+ C C + CP AI
Sbjct: 162 NSCIYCSICAQTCPWNAI 179
Score = 60.5 bits (145), Expect = 3e-14
Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 40/145 (27%)
Query: 38 CILCNRCLEVCPVTAISSN-----------FPEVP-DIDNKCVYCNTCVETCPVDAIKIT 85
C+ C +C+E CP + P+ P + CV C C+ CPV A+ I
Sbjct: 94 CVGCMKCVEACPDDYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSI- 152
Query: 86 KTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI--------SESDDTIS 137
+ +K ++ C+ C +C + CP+ AI + +
Sbjct: 153 -----------------EGEKAVVDKNSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVK 195
Query: 138 FNMDK--CVLCGHCEEICPAKAIKL 160
F++D C+ CG C + CP I L
Sbjct: 196 FSVDSDLCIGCGDCTDKCPRDLIVL 220
Score = 56.2 bits (134), Expect = 6e-13
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 21/129 (16%)
Query: 36 EICILCNRCLEVCPVTAISSNFPEVPDIDNK-----------CVYCNTCVETCPVDAIKI 84
E C C C CP AI+ P+ ++ ++ C+ C CV++CP DA++I
Sbjct: 268 EKCAYCGPCAIKCPNNAINVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI 327
Query: 85 TKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMDKCV 144
K II + + ++++++ C C C + CP++ ++ + CV
Sbjct: 328 GK----------IIHDGKEYERIEFSPNLCDSCGKCIETCPYDMLNLTGKPEKPLEGFCV 377
Query: 145 LCGHCEEIC 153
+C C E C
Sbjct: 378 MCLKCIEAC 386
Score = 44.3 bits (103), Expect = 2e-09
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 30 KIEINPEICILCNRCLEVCPVTAIS-SNFPEVPDIDNKCVYCNTCVETC 77
+IE +P +C C +C+E CP ++ + PE P ++ CV C C+E C
Sbjct: 339 RIEFSPNLCDSCGKCIETCPYDMLNLTGKPEKP-LEGFCVMCLKCIEAC 386