Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 202 a.a., formate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 49/198 (24%), Positives = 72/198 (36%), Gaps = 42/198 (21%)

Query: 80  DAGSCINCGNCVESCPT---NVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSC--GTC 134
           D   CI C  CV +C     + LE G  R+    L    P   ++ +    C+ C    C
Sbjct: 9   DTKRCIECNGCVTACKNENDDALEWGIQRRRVVTLNDGEPGENSISV---ACMHCTDAPC 65

Query: 135 ENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKF 194
              CP D   H   G+   + +LC+ C  CL ACP       +  P+  ++    +  K 
Sbjct: 66  MAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACP-------FGAPQFPKQAAFGERGKM 118

Query: 195 DRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVCPGSIDLERLKVTSCIKSGK---C 251
           D+                        C  C    +  PGS +  R    + I  GK   C
Sbjct: 119 DK------------------------CTFCAGGPETEPGSEEERRKYGANRIAEGKLPMC 154

Query: 252 LEVCPTTAIRIGVPEKIT 269
             +C T A+  G  EKI+
Sbjct: 155 ASLCSTKALLAGDAEKIS 172



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 18/114 (15%)

Query: 221 CIGCGNCVDVCPGSIDLERLKVTSCIKSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDE 280
           CI C  CV  C    D         ++ G  ++      +  G P + +   A C    +
Sbjct: 13  CIECNGCVTACKNEND-------DALEWG--IQRRRVVTLNDGEPGENSISVA-CMHCTD 62

Query: 281 EKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAIDYLK 334
             C+   +C   C       +  E  +   N + C+ CG C  ACP  A  + K
Sbjct: 63  APCMA--VCPADC------FVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPK 108



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 6/50 (12%)

Query: 41  VIFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNC 90
           ++    + CI C  C  +CP  A       +F K+    + G    C  C
Sbjct: 81  IVLHNKDLCIGCGYCLFACPFGA------PQFPKQAAFGERGKMDKCTFC 124