Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 193 a.a., NAD(P)H-quinone oxidoreductase subunit I from Synechocystis sp000284455 PCC 6803

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 9/80 (11%)

Query: 28  ESFIPPERFR-KIPVIFDLPEKCISCSACKESCPSD--AISMEFNEEFKK-EMPVF--DA 81
           E  IP ERFR +I   FD   KCI+C  C   CP +   +  EFN+  KK E+  +  D 
Sbjct: 46  EKLIPSERFRGRIHFEFD---KCIACEVCVRVCPINLPVVDWEFNKAVKKKELKHYSIDF 102

Query: 82  GSCINCGNCVESCPTNVLEM 101
           G CI CGNCVE CPTN L M
Sbjct: 103 GVCIFCGNCVEYCPTNCLSM 122



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 11/66 (16%)

Query: 128 CVSCGTCENACPVD----------AISHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTY 177
           C++C  C   CP++          A+       Y ID  +C+ C NC++ CP  N +   
Sbjct: 65  CIACEVCVRVCPINLPVVDWEFNKAVKKKELKHYSIDFGVCIFCGNCVEYCPT-NCLSMT 123

Query: 178 SEPELS 183
            E EL+
Sbjct: 124 EEYELA 129



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 79  FDAGSCINCGNCVESCPTNVLEMG-TLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENA 137
           F+   CI C  CV  CP N+  +     K  K+      ++ +  ID  VC+ CG C   
Sbjct: 60  FEFDKCIACEVCVRVCPINLPVVDWEFNKAVKK-----KELKHYSIDFGVCIFCGNCVEY 114

Query: 138 CPVDAIS 144
           CP + +S
Sbjct: 115 CPTNCLS 121



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 23/84 (27%)

Query: 149 GLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSD 208
           G    + + C++C+ C++ CP+   +V +               +F++     E K  S 
Sbjct: 56  GRIHFEFDKCIACEVCVRVCPINLPVVDW---------------EFNKAVKKKELKHYS- 99

Query: 209 VIAEIPRIVPSLCIGCGNCVDVCP 232
                  I   +CI CGNCV+ CP
Sbjct: 100 -------IDFGVCIFCGNCVEYCP 116



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 281 EKCIGCRICYRSC--NVP----EAILISKETNLPYINPEY--CVRCGLCQNACPVDAI 330
           +KCI C +C R C  N+P    E     K+  L + + ++  C+ CG C   CP + +
Sbjct: 63  DKCIACEVCVRVCPINLPVVDWEFNKAVKKKELKHYSIDFGVCIFCGNCVEYCPTNCL 120



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 16/56 (28%)

Query: 221 CIGCGNCVDVCPGSIDL-----------ERLKVTS-----CIKSGKCLEVCPTTAI 260
           CI C  CV VCP ++ +           + LK  S     CI  G C+E CPT  +
Sbjct: 65  CIACEVCVRVCPINLPVVDWEFNKAVKKKELKHYSIDFGVCIFCGNCVEYCPTNCL 120