Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 202 a.a., NADH dehydrogenase subunit I from Synechococcus elongatus PCC 7942

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 9/80 (11%)

Query: 28  ESFIPPERFR-KIPVIFDLPEKCISCSACKESCPSD--AISMEFNEEFKKE---MPVFDA 81
           E  IP ER+R +I   FD   KCI+C  C   CP +   +   +N+E KK+       D 
Sbjct: 45  EKLIPSERYRGRIHYEFD---KCIACEVCVRVCPINLPVVDWVYNKETKKKDLKNYSIDF 101

Query: 82  GSCINCGNCVESCPTNVLEM 101
           G+CI CGNCVE CPTN L M
Sbjct: 102 GACIFCGNCVEYCPTNCLSM 121



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 79  FDAGSCINCGNCVESCPTNVLEMGTL-RKEAKELLWNVPKIINLLIDEEVCVSCGTCENA 137
           ++   CI C  CV  CP N+  +  +  KE K+       + N  ID   C+ CG C   
Sbjct: 59  YEFDKCIACEVCVRVCPINLPVVDWVYNKETKK-----KDLKNYSIDFGACIFCGNCVEY 113

Query: 138 CPVDAIS 144
           CP + +S
Sbjct: 114 CPTNCLS 120



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 17/73 (23%)

Query: 128 CVSCGTCENACP-----VDAISHNNTGL-----YEIDVNLCVSCKNCLKACPV------- 170
           C++C  C   CP     VD + +  T       Y ID   C+ C NC++ CP        
Sbjct: 64  CIACEVCVRVCPINLPVVDWVYNKETKKKDLKNYSIDFGACIFCGNCVEYCPTNCLSMTE 123

Query: 171 ENAIVTYSEPELS 183
           E  + TY   EL+
Sbjct: 124 EYELATYDRHELN 136



 Score = 36.6 bits (83), Expect = 6e-07
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 25/82 (30%)

Query: 151 YEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVI 210
           YE D   C++C+ C++ CP+   +V +                +++E    + K  S   
Sbjct: 59  YEFDK--CIACEVCVRVCPINLPVVDWV---------------YNKETKKKDLKNYS--- 98

Query: 211 AEIPRIVPSLCIGCGNCVDVCP 232
                I    CI CGNCV+ CP
Sbjct: 99  -----IDFGACIFCGNCVEYCP 115



 Score = 33.9 bits (76), Expect = 4e-06
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 281 EKCIGCRICYRSC--NVPEAILI----SKETNLPYINPEY--CVRCGLCQNACPVDAI 330
           +KCI C +C R C  N+P    +    +K+ +L   + ++  C+ CG C   CP + +
Sbjct: 62  DKCIACEVCVRVCPINLPVVDWVYNKETKKKDLKNYSIDFGACIFCGNCVEYCPTNCL 119



 Score = 33.1 bits (74), Expect = 7e-06
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 16/56 (28%)

Query: 221 CIGCGNCVDVCPGSI--------------DLERLKVT--SCIKSGKCLEVCPTTAI 260
           CI C  CV VCP ++              DL+   +   +CI  G C+E CPT  +
Sbjct: 64  CIACEVCVRVCPINLPVVDWVYNKETKKKDLKNYSIDFGACIFCGNCVEYCPTNCL 119