Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., electron transport complex, RnfABCDGE type, B subunit from Dechlorosoma suillum PS

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 104 LRKEAKEL--LWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSC 161
           L +EAK L  +   P++   LIDE  C+ C  C  ACPVDAI      ++ I  +LC  C
Sbjct: 86  LGREAKPLDGVEKPPQVA--LIDENTCIGCTLCIQACPVDAIVGAAKQMHTIVESLCTGC 143

Query: 162 KNCLKACPVE 171
           + CL  CPVE
Sbjct: 144 ELCLPPCPVE 153



 Score = 43.5 bits (101), Expect = 5e-09
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 277 IVDEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330
           ++DE  CIGC +C ++C V   +  +K+ +   I    C  C LC   CPV+ I
Sbjct: 104 LIDENTCIGCTLCIQACPVDAIVGAAKQMHT--IVESLCTGCELCLPPCPVECI 155



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 32  PPERFRKIPVIFDLPEK-CISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNC 90
           P +   K P +  + E  CI C+ C ++CP DAI         K+M       C  C  C
Sbjct: 92  PLDGVEKPPQVALIDENTCIGCTLCIQACPVDAI-----VGAAKQMHTIVESLCTGCELC 146

Query: 91  VESCPTNVLEMGTLRKEAKELLWNVPKI 118
           +  CP   + M  +++      W  P +
Sbjct: 147 LPPCPVECITMEPIQETVDTWKWKYPVV 174



 Score = 36.6 bits (83), Expect = 6e-07
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 20/89 (22%)

Query: 56  KESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNV 115
           +E+ P D +      E   ++ + D  +CI C  C+++CP + + +G     AK++    
Sbjct: 88  REAKPLDGV------EKPPQVALIDENTCIGCTLCIQACPVDAI-VGA----AKQM---- 132

Query: 116 PKIINLLIDEEVCVSCGTCENACPVDAIS 144
                  I E +C  C  C   CPV+ I+
Sbjct: 133 -----HTIVESLCTGCELCLPPCPVECIT 156



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 301 ISKETNLPYINPEYCVRCGLCQNACPVDAI 330
           + K   +  I+   C+ C LC  ACPVDAI
Sbjct: 96  VEKPPQVALIDENTCIGCTLCIQACPVDAI 125



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 8/52 (15%)

Query: 244 SCIKSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRSCNV 295
           +CI    C++ CP  AI +G  +++       + + E  C GC +C   C V
Sbjct: 109 TCIGCTLCIQACPVDAI-VGAAKQM-------HTIVESLCTGCELCLPPCPV 152



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 6/55 (10%)

Query: 212 EIPRIVPSLCIGCGNCVDVCP------GSIDLERLKVTSCIKSGKCLEVCPTTAI 260
           ++  I  + CIGC  C+  CP       +  +  +  + C     CL  CP   I
Sbjct: 101 QVALIDENTCIGCTLCIQACPVDAIVGAAKQMHTIVESLCTGCELCLPPCPVECI 155