Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 211 a.a., Probable NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I) from Mycobacterium tuberculosis H37Rv

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 14/67 (20%)

Query: 47  EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGS------------CINCGNCVESC 94
           EKCI C  C  +CP+DAI +E  +  ++E   F  G             CI CG C+E+C
Sbjct: 79  EKCIGCELCAWACPADAIYVEGADNTEEER--FSPGERYGRVYQINYLRCIGCGLCIEAC 136

Query: 95  PTNVLEM 101
           PT  L M
Sbjct: 137 PTRALTM 143



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 18/89 (20%)

Query: 126 EVCVSCGTCENACPVDAI---SHNNTG------------LYEIDVNLCVSCKNCLKACPV 170
           E C+ C  C  ACP DAI     +NT             +Y+I+   C+ C  C++ACP 
Sbjct: 79  EKCIGCELCAWACPADAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEACPT 138

Query: 171 ENAIVTYSEPELSEKIEIAQNIKFDRERL 199
               +TY + EL++  +   ++ ++++RL
Sbjct: 139 RALTMTY-DYELAD--DNRADLIYEKDRL 164



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 25  SEKESFIPPERFRKIPVIFDLPEKCISCSACKESCPSDAISMEFNEE 71
           +E+E F P ER+ ++  I  L  +CI C  C E+CP+ A++M ++ E
Sbjct: 104 TEEERFSPGERYGRVYQINYL--RCIGCGLCIEACPTRALTMTYDYE 148



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 15/64 (23%)

Query: 281 EKCIGCRICYRSCNVPEAILISKETNLP--------------YINPEYCVRCGLCQNACP 326
           EKCIGC +C  +C   +AI +    N                 IN   C+ CGLC  ACP
Sbjct: 79  EKCIGCELCAWACPA-DAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEACP 137

Query: 327 VDAI 330
             A+
Sbjct: 138 TRAL 141



 Score = 37.0 bits (84), Expect = 5e-07
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 20/100 (20%)

Query: 135 ENACPVDAISHNNTGL--YEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNI 192
           E   PV A  H    L  Y   +  C+ C+ C  ACP +   V           E A N 
Sbjct: 56  ERPGPVAARYHGRHQLNRYPDGLEKCIGCELCAWACPADAIYV-----------EGADNT 104

Query: 193 KFDRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVCP 232
           + +R   G  +         + +I    CIGCG C++ CP
Sbjct: 105 EEERFSPGERY-------GRVYQINYLRCIGCGLCIEACP 137



 Score = 30.0 bits (66), Expect = 6e-05
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 21/61 (34%)

Query: 221 CIGCGNCVDVCP-------GSIDLE--------------RLKVTSCIKSGKCLEVCPTTA 259
           CIGC  C   CP       G+ + E              ++    CI  G C+E CPT A
Sbjct: 81  CIGCELCAWACPADAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEACPTRA 140

Query: 260 I 260
           +
Sbjct: 141 L 141



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 245 CIKSGKCLEVCPTTAIRIGVPEKITK-------RTAECYIVDEEKCIGCRICYRSC 293
           CI    C   CP  AI +   +   +       R    Y ++  +CIGC +C  +C
Sbjct: 81  CIGCELCAWACPADAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEAC 136



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 313 EYCVRCGLCQNACPVDAIDYLKTETSED 340
           E C+ C LC  ACP DAI     + +E+
Sbjct: 79  EKCIGCELCAWACPADAIYVEGADNTEE 106