Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 57.0 bits (136), Expect = 3e-13
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 114 NVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVENA 173
           ++PKII    D+E C+ CG C   CPV A+S +      +D + C+ CKNC K CPV NA
Sbjct: 70  DIPKIIQK--DDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPV-NA 126

Query: 174 I 174
           I
Sbjct: 127 I 127



 Score = 52.4 bits (124), Expect = 7e-12
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 12/75 (16%)

Query: 34  ERFRKIPVIFDLP-------EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCIN 86
           E  +K   + D+P       EKCI C AC   CP  A+S++  EEFK    + D   CI 
Sbjct: 60  EILKKFGEVEDIPKIIQKDDEKCIDCGACVVHCPVGALSVD--EEFK---ILLDEDECIG 114

Query: 87  CGNCVESCPTNVLEM 101
           C NC + CP N +++
Sbjct: 115 CKNCAKICPVNAIKI 129



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 9/70 (12%)

Query: 202 EFKEKSDVIAEIPRIVPS---LCIGCGNCVDVCP-GSIDLER-----LKVTSCIKSGKCL 252
           E  +K   + +IP+I+      CI CG CV  CP G++ ++      L    CI    C 
Sbjct: 60  EILKKFGEVEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCA 119

Query: 253 EVCPTTAIRI 262
           ++CP  AI+I
Sbjct: 120 KICPVNAIKI 129



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 279 DEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330
           D+EKCI C  C   C V  A+ + +E  +  ++ + C+ C  C   CPV+AI
Sbjct: 78  DDEKCIDCGACVVHCPV-GALSVDEEFKI-LLDEDECIGCKNCAKICPVNAI 127



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 245 CIKSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRSCNV 295
           CI  G C+  CP  A+ +    KI        ++DE++CIGC+ C + C V
Sbjct: 82  CIDCGACVVHCPVGALSVDEEFKI--------LLDEDECIGCKNCAKICPV 124