Pairwise Alignments
Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 102 bits (254), Expect = 1e-26
Identities = 77/253 (30%), Positives = 108/253 (42%), Gaps = 53/253 (20%)
Query: 27 KESFIPPERFRKIPVIFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCIN 86
K+ +P ER ++ KCI C C E CP DAI E K C+
Sbjct: 31 KDLMVPVERN-----LYVESNKCIRCELCYEVCPVDAIK----EPSVKSPAEIIPEKCVK 81
Query: 87 CGNCVESCPT---NVLEMGTLRKEAKELLWNVPKI------INLL---IDEEVCVSCGTC 134
C C ++CP NVLE G + E +++ + +I I L+ +DEE C+ CG C
Sbjct: 82 CEICAKTCPVGAINVLE-GRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGIC 140
Query: 135 ENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKF 194
E CP AI+ +I+++LC+ C C K CP V E++ + EI+ N
Sbjct: 141 ERFCPTSAITVEKRNSIDINLDLCMGCTACEKVCPKSAIKVENEMGEITAENEISLN--- 197
Query: 195 DRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVCP-GSIDLE----RLKVTSCIKSG 249
CI C C ++CP G+I E +L CI G
Sbjct: 198 -----------------------NDTCINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCG 234
Query: 250 KCLEVCPTTAIRI 262
KC + CP TAI I
Sbjct: 235 KCEKNCPVTAIAI 247
Score = 95.1 bits (235), Expect = 2e-24
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 104 LRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNT-GLYEIDVNLCVSCK 162
++++ K+L+ VP NL ++ C+ C C CPVDAI + EI CV C+
Sbjct: 26 VKEKLKDLM--VPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCE 83
Query: 163 NCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSLCI 222
C K CPV V +L E + ++ + + ++ V E+ CI
Sbjct: 84 ICAKTCPVGAINVLEGRAKLEE-----DTVVYELKEIDVTHRKIRLVKHELDE---ESCI 135
Query: 223 GCGNCVDVCPGS-IDLER-----LKVTSCIKSGKCLEVCPTTAIRIGVPEKITKRTAECY 276
CG C CP S I +E+ + + C+ C +VCP +AI+ V ++ + TAE
Sbjct: 136 KCGICERFCPTSAITVEKRNSIDINLDLCMGCTACEKVCPKSAIK--VENEMGEITAENE 193
Query: 277 I-VDEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330
I ++ + CI C +C C V + E L ++ + C+ CG C+ CPV AI
Sbjct: 194 ISLNNDTCINCMVCSEICPVGAIVY---EDGLMKLDDKMCIFCGKCEKNCPVTAI 245
Score = 59.7 bits (143), Expect = 9e-14
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 174 IVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVCPG 233
++T +P +I++N+ D + + + K+ + + + CI C C +VCP
Sbjct: 1 MITVKKPVQKIISDISKNLGIDEKFVKEKLKDLMVPVERNLYVESNKCIRCELCYEVCPV 60
Query: 234 SIDLE-------RLKVTSCIKSGKCLEVCPTTAI-----RIGVPE----------KITKR 271
E + C+K C + CP AI R + E +T R
Sbjct: 61 DAIKEPSVKSPAEIIPEKCVKCEICAKTCPVGAINVLEGRAKLEEDTVVYELKEIDVTHR 120
Query: 272 TAEC--YIVDEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDA 329
+ +DEE CI C IC R C P + + ++ N IN + C+ C C+ CP A
Sbjct: 121 KIRLVKHELDEESCIKCGICERFC--PTSAITVEKRNSIDINLDLCMGCTACEKVCPKSA 178
Query: 330 I 330
I
Sbjct: 179 I 179
Score = 50.8 bits (120), Expect = 4e-11
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 262 IGVPEKITKRTAECYIVDEE--------KCIGCRICYRSCNVPEAILISKETNLPYINPE 313
+G+ EK K + +V E KCI C +CY C V +AI + I PE
Sbjct: 19 LGIDEKFVKEKLKDLMVPVERNLYVESNKCIRCELCYEVCPV-DAIKEPSVKSPAEIIPE 77
Query: 314 YCVRCGLCQNACPVDAIDYL----KTETSEDLYSKRKI 347
CV+C +C CPV AI+ L K E +Y ++I
Sbjct: 78 KCVKCEICAKTCPVGAINVLEGRAKLEEDTVVYELKEI 115
Score = 37.7 bits (86), Expect = 4e-07
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 299 ILISKETNLPYINPEYCVRCGLCQNACPVDAIDYLKTETSEDLYSKRKIRDE 350
+++ E NL Y+ C+RC LC CPVDAI ++ ++ ++ ++ E
Sbjct: 33 LMVPVERNL-YVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCE 83
Score = 25.8 bits (55), Expect = 0.001
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 49 CISCSACKESCPSDAISME 67
CI C C+++CP AI+++
Sbjct: 230 CIFCGKCEKNCPVTAIAIK 248