Pairwise Alignments
Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 116 bits (290), Expect = 2e-30
Identities = 86/325 (26%), Positives = 135/325 (41%), Gaps = 70/325 (21%)
Query: 47 EKCISC-----SACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
E+C +C S C E CP++AI M + F SCI CG C + CPT
Sbjct: 13 EECENCKSKEISKCMEVCPTNAIKMIDGKAF----------SCITCGTCAKECPT----- 57
Query: 102 GTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAIS--HNNTGLYEIDVNLCV 159
G ++K + ++ ++C CG C+NACP+D I ++TG +CV
Sbjct: 58 GAIKKN---------EYGGYYVNRKLCTGCGICKNACPIDIIDIREDSTGK-AYPTGMCV 107
Query: 160 SCKNCLKACPVENAIVTYSEPE---------LSEKIE-----IAQNIKFDRERLGSEFKE 205
C C CP + Y +P L E+ + + +F ++ K
Sbjct: 108 MCGLCTTECPYNARL--YFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEQKHVKIVKP 165
Query: 206 KSDVIAEIPRIVPSLCIGCGNCVDVCPGSIDLERLKVTSCIKSGKCLEVCPTTAIRIGVP 265
++ I C+ CG C+ VCP +E V C + C EVCP AI+ G
Sbjct: 166 TERMLRHSISIDSEKCVECGKCIYVCPKDTIIEAEIVDGCTRCNICNEVCPVDAIKYG-- 223
Query: 266 EKITKRTAECYIVDEEKCIGCRICYRSC-----NVPEAILISKETNLPYINPEYCVRCGL 320
++T E CI C C C + E ++ + ++ ++C+ CGL
Sbjct: 224 -EVT-----------ENCILCGNCISKCPKDALEISEFKVVKTKEDVKANPEKHCINCGL 271
Query: 321 CQNACPVDAIDYLKTETSEDLYSKR 345
C + CP +A L+ E + LY +
Sbjct: 272 CVDKCPSNA---LRFENGKILYDPK 293
Score = 108 bits (271), Expect = 3e-28
Identities = 82/308 (26%), Positives = 122/308 (39%), Gaps = 81/308 (26%)
Query: 44 DLPEKCISCSACKESCPSDAISM-EFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMG 102
++ + C C+ C E CP DAI E E +CI CGNC+ CP + LE+
Sbjct: 200 EIVDGCTRCNICNEVCPVDAIKYGEVTE------------NCILCGNCISKCPKDALEIS 247
Query: 103 TLR--KEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVS 160
+ K +++ N E+ C++CG C + CP +A+ N G D C
Sbjct: 248 EFKVVKTKEDVKAN---------PEKHCINCGLCVDKCPSNALRFEN-GKILYDPKTCTL 297
Query: 161 CKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSL 220
C C+K CP Q ++ ++ V
Sbjct: 298 CNTCVKECP--------------------QGVRINK-----------------GGFVDGG 320
Query: 221 CIGCGNCVDVCP-GSIDL-ERLKVTS-----CIKSGKCLEVCPTTAIRIGVPE-KITKRT 272
C+ C C+ CP +I + ER K TS CI G C VCP AI + + +
Sbjct: 321 CVLCEVCIKECPEDAISIKERSKFTSIDKKECIACGTCSMVCPNDAITVKIDSLNFSGNK 380
Query: 273 AECYIVDEEKCIGCRICYRSCNVPEAILISKETNLPYINPE---------YCVRCGLCQN 323
++ + C+ C C C P ++ + ++PE YCV+CGLC
Sbjct: 381 VHSEVIFNDNCVLCEKCAIHC--PRDVIENTSGYKKVVDPENSYIRVDDGYCVKCGLCTI 438
Query: 324 ACPVDAID 331
CP DAID
Sbjct: 439 ICPNDAID 446
Score = 99.0 bits (245), Expect = 3e-25
Identities = 87/310 (28%), Positives = 115/310 (37%), Gaps = 76/310 (24%)
Query: 44 DLPEKCISCSACKESCPSDAISM-EFN-EEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
++ E CI C C CP DA+ + EF + K+++ CINCG CV+ CP+N L
Sbjct: 224 EVTENCILCGNCISKCPKDALEISEFKVVKTKEDVKANPEKHCINCGLCVDKCPSNALRF 283
Query: 102 GTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSC 161
+ +L D + C C TC CP + N G + CV C
Sbjct: 284 ENGK---------------ILYDPKTCTLCNTCVKECP-QGVRINKGGFVD---GGCVLC 324
Query: 162 KNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSLC 221
+ C+K CP E+AI KE+S + I C
Sbjct: 325 EVCIKECP-EDAI---------------------------SIKERS----KFTSIDKKEC 352
Query: 222 IGCGNCVDVCPG--------SIDLERLKVTS-------CIKSGKCLEVCPTTAIRIGVPE 266
I CG C VCP S++ KV S C+ KC CP I
Sbjct: 353 IACGTCSMVCPNDAITVKIDSLNFSGNKVHSEVIFNDNCVLCEKCAIHCPRDVIENTSGY 412
Query: 267 KITKRTAECYI-VDEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNAC 325
K YI VD+ C+ C +C C P + E I E C C C N C
Sbjct: 413 KKVVDPENSYIRVDDGYCVKCGLCTIIC--PNDAIDKGE-----ITTERCEYCSACVNIC 465
Query: 326 PVDAIDYLKT 335
P AI +T
Sbjct: 466 PTRAIRIYRT 475