Pairwise Alignments
Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 116 bits (291), Expect = 1e-30
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 72/296 (24%)
Query: 47 EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRK 106
+ C+ C+AC ++CP++AI + FK +CI C +C +CPT L + K
Sbjct: 9 DACLVCNACAKACPTEAIEI---APFK---------TCIQCFSCATACPTGAL----VEK 52
Query: 107 EAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNL------CVS 160
+ K L+ + C G C+ ACPV G+ ++D CV
Sbjct: 53 DGK-----------LVFNGSKCDLDGACQKACPV--------GIKKVDDRFPYSKGHCVL 93
Query: 161 CKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSL 220
C+ C+ CP E S P +EK +K +I + P V
Sbjct: 94 CEKCVDICPAE----IISLPGKAEK------------------PKKEIIIPQEPIAVTKD 131
Query: 221 CIGCGNCVDVCP-GSIDLERLKV---TSCIKSGKCLEVCPTTAIRIG--VPEKITKRTAE 274
C+ CG CV CP +I +E + V CI C + CP AI + +P+K ++T +
Sbjct: 132 CVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQK-RQKTIK 190
Query: 275 CYIVDEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330
+ V+EE+CIGC C +C P +++ L P C CGLC +CPV+ I
Sbjct: 191 SFTVNEEECIGCEKCVEAC--PGSMIEYNGEALGVKLPGACPACGLCVESCPVEVI 244
Score = 112 bits (279), Expect = 2e-29
Identities = 88/320 (27%), Positives = 129/320 (40%), Gaps = 68/320 (21%)
Query: 49 CISCSACKESCPSDAI------------SMEFNEEFKKEMPV----------FDAGSCIN 86
CI C +C +CP+ A+ + + +K PV + G C+
Sbjct: 34 CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVL 93
Query: 87 CGNCVESCPTNVLEM-GTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISH 145
C CV+ CP ++ + G K KE++ +P+ + + CV+CG C CPVDAIS
Sbjct: 94 CEKCVDICPAEIISLPGKAEKPKKEII--IPQ--EPIAVTKDCVACGVCVPECPVDAISI 149
Query: 146 NNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKE 205
+ + ID + C+ C C + CP V P+ +K
Sbjct: 150 EDIAV--IDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTI------------------ 189
Query: 206 KSDVIAEIPRIVPSLCIGCGNCVDVCPGSI---DLERLKVT---SCIKSGKCLEVCPTTA 259
KS + E CIGC CV+ CPGS+ + E L V +C G C+E CP
Sbjct: 190 KSFTVNE------EECIGCEKCVEACPGSMIEYNGEALGVKLPGACPACGLCVESCPVEV 243
Query: 260 IRIGVPEKITKR-TAECYIVDEEKCIGCRICYRSCNV-------PEAILISKETNLPYIN 311
I + V K T E + EEKC C C C P+ + + + N
Sbjct: 244 ISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKAN 303
Query: 312 P-EYCVRCGLCQNACPVDAI 330
C+RCG C CP A+
Sbjct: 304 EFAMCIRCGACAMKCPTGAL 323
Score = 98.6 bits (244), Expect = 3e-25
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 65/319 (20%)
Query: 24 KSEKESFIPPERFRKIPVIFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGS 83
K +KE IP E P+ + + C++C C CP DAIS+E ++ V D
Sbjct: 114 KPKKEIIIPQE-----PIA--VTKDCVACGVCVPECPVDAISIE-------DIAVIDTDK 159
Query: 84 CINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAI 143
CI C C ++CP N + + + ++ I + ++EE C+ C C ACP I
Sbjct: 160 CIYCTVCSQTCPWNAIFVAGKLPQKRQ-----KTIKSFTVNEEECIGCEKCVEACPGSMI 214
Query: 144 SHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEF 203
+N L C +C C+++CPVE +++ S K + + + E+
Sbjct: 215 EYNGEALGVKLPGACPACGLCVESCPVE--VISLEVEYASAKPVTDEGLVWSEEK----- 267
Query: 204 KEKSDVIAEIPRIVPSLCIGCGNCVDVC---------PGSIDLERLKVTS-------CIK 247
C CG C C P ++L K T CI+
Sbjct: 268 -----------------CAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIR 310
Query: 248 SGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRSCNVPEAIL-ISKETN 306
G C CPT A+++G K A C C C C P+ L ++ +
Sbjct: 311 CGACAMKCPTGALKMGKMVHEGKEYARVEF-SPALCNECGECVDVC--PQKTLELTGDDK 367
Query: 307 LPYINPEYCVRCGLCQNAC 325
+P YCV C C AC
Sbjct: 368 MPL--KGYCVMCLKCIEAC 384
Score = 49.3 bits (116), Expect = 2e-10
Identities = 52/210 (24%), Positives = 77/210 (36%), Gaps = 73/210 (34%)
Query: 153 IDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAE 212
I + C+ C C KACP +E IEIA FK
Sbjct: 6 IQEDACLVCNACAKACP-------------TEAIEIAP------------FKT------- 33
Query: 213 IPRIVPSLCIGCGNCVDVCPGSIDLER-----LKVTSCIKSGKCLEVCPTTAIRIGVPEK 267
CI C +C CP +E+ + C G C + CP +G+
Sbjct: 34 --------CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACP-----VGI--- 77
Query: 268 ITKRTAECYIVDEEKCIGCRICYRSC-----NVP-------EAILISKETNLPYINPEYC 315
K+ + + + C+ C C C ++P + I+I +E P + C
Sbjct: 78 --KKVDDRFPYSKGHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQE---PIAVTKDC 132
Query: 316 VRCGLCQNACPVDAI---DYLKTETSEDLY 342
V CG+C CPVDAI D +T + +Y
Sbjct: 133 VACGVCVPECPVDAISIEDIAVIDTDKCIY 162