Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 394 a.a., NAD(P)H-quinone oxidoreductase subunit H from Synechococcus elongatus PCC 7942

 Score =  131 bits (330), Expect = 3e-35
 Identities = 110/386 (28%), Positives = 170/386 (44%), Gaps = 33/386 (8%)

Query: 3   VVPIGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKHYLKCIHLSERVC 62
           V+ +GP HP +   LR+ + ++GENV   E  +GY+HRG+E+I E +  +  +    R  
Sbjct: 12  VLNMGPHHPSMHGVLRLIVTLDGENVIDCEPVIGYLHRGMEKIAENRSNVMFVPYVSRWD 71

Query: 63  GICSYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETLG 122
                 +        E + +I VP++A Y+RVI  EL RI +HL+    +   +  +T  
Sbjct: 72  YAAGMFNEAITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPF 131

Query: 123 IWMLNVRESIMDLLELITGNR-VNMGFNVVGGVRLDLNKEILDKIHKKIDEFEEDVKNII 181
            ++   RE I DL E  TG R +N  +  +GGV  DL    L+K     D F+  V    
Sbjct: 132 FYIFRERELIYDLWEAATGQRLINNNYFRIGGVAADLPYGWLEKCIDFCDYFQAKVDEYE 191

Query: 182 EVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIRH-ETYKALNFKPD 240
            +    P+   R + IG I  +E +    +GP+ R SG+     R+ H E Y   ++   
Sbjct: 192 RLITDNPIFRRRVEGIGVISREEALNWSLSGPMLRGSGVKWDLRRVDHYECYDDFDWDVI 251

Query: 241 WRNEGDNYARMMVRHDEVLTSVELIRRALEHYAESSGIVRNKAEIRATEG---EWYN--- 294
              EGD +AR  VR  E+  S+++IR+A        G   N    R  EG   EWY    
Sbjct: 252 TAEEGDCFARYRVRVQEMRESLKIIRQACA--GIPGGPYENLEARRMAEGKKSEWYGPDY 309

Query: 295 ----------------------EAHRGEVYYKIAITDGGLIKRIIIRTPTVMNLEAYKYM 332
                                 E+ +GE+   I   D     R  IR P   NL+    +
Sbjct: 310 QYVSKKVAPTFKIPAGEHYVRLESGKGELGVFIQGADDICPWRFKIRAPDFNNLQILPQL 369

Query: 333 IKDCPTIADAVATYTSIDPCVSCTER 358
           ++    +AD +A   SID  +   +R
Sbjct: 370 LQGV-KVADIMAILGSIDVIMGSVDR 394