Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 569 a.a., hydrogenase 3 large subunit from Klebsiella michiganensis M5al

 Score =  182 bits (462), Expect = 2e-50
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 5/360 (1%)

Query: 2   NVVPIGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKH-YLKCIHLSER 60
           NVVPIGP+H    EP   +L V+GEN+  A+  + YVHRG+E++ E +  Y +   LS+R
Sbjct: 180 NVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDR 239

Query: 61  VCGICSYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHET 120
           VCGIC + H+ ++   +EN   I VPE+A+ +R I  E+ER+HSHL+   +       ++
Sbjct: 240 VCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDS 299

Query: 121 LGIWMLNVRESIMDLLELITGNRVNMGFNVVGGVRLDLNKEILDKIHKKIDEFEEDVKNI 180
             +    VRE+ M + E++TG R   G N++GG+R DL KE + +  +   +   DV+ +
Sbjct: 300 GFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQEL 359

Query: 181 IEVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIRHE--TYKALNFK 238
           +++  + P +  R+  IG++  +        GP+ RASG    D R  H    Y  L   
Sbjct: 360 VDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASG-HARDTRADHPFVGYGLLPMT 418

Query: 239 PDWRNEGDNYARMMVRHDEVLTSVELIRRALEHYAESSGIVRNKAEIRATEGEWYNEAHR 298
                  D  +R+ VR +EV T++ +I   L++      +V     I       ++EA R
Sbjct: 419 VHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTYIPHRFALGFSEAPR 478

Query: 299 GEVYYKIAITDGGLIKRIIIRTPTVMNLEAYKYMIKDCPTIADAVATYTSIDPCVSCTER 358
           G+  +     D   + R   R  T  N    +YM++   T++DA     S+DPC SCT+R
Sbjct: 479 GDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRG-NTVSDAPLIIGSLDPCYSCTDR 537