Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 598 a.a., NADH-quinone oxidoreductase subunit C/D from Klebsiella michiganensis M5al

 Score =  107 bits (268), Expect = 7e-28
 Identities = 80/280 (28%), Positives = 143/280 (51%), Gaps = 20/280 (7%)

Query: 6   IGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKHYLKCIHLSERVCGIC 65
           +GP HP      RI L ++GE +     D+GY HRG E++ E + +   I  ++R+  + 
Sbjct: 218 LGPNHPSAHGAFRIILQLDGEEIIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 277

Query: 66  SYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETLGIWM 125
             ++   +   +E +  I VP++   +RV+  EL RI+SHL+  + +   +   T   + 
Sbjct: 278 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 337

Query: 126 LNVRESIMDLLELITGNRVNMGFNVVGGVRLDLN-------KEILDKIHKKIDEFEE-DV 177
              R+ I DL+E ITG R++  +  +GGV  DL        +E L+ + K++D +E+  +
Sbjct: 338 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLEWMPKRLDSYEKAAL 397

Query: 178 KNIIEVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGI--PESDWRIRHETYKAL 235
           +N I       LIG RSK +     KE ++    G   RA+GI      WR  +  Y+  
Sbjct: 398 RNTI-------LIG-RSKGVAAYNAKEALEWGTTGAGLRATGIGFDVRKWR-PYSGYENF 448

Query: 236 NFK-PDWRNEGDNYARMMVRHDEVLTSVELIRRALEHYAE 274
           +F+ P      D Y R+M++ +E+  S+ ++++ L++  E
Sbjct: 449 DFEIPTGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPE 488