Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 235 a.a., NADH dehydrogenase subunit B from Synechococcus elongatus PCC 7942

 Score =  106 bits (264), Expect = 3e-28
 Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 8/127 (6%)

Query: 24  CDIEIVSCLAPRYDIEQYGIYVHNNPREADVLVVTGPVTGAWEKRLLEIYEKTPEPKIVI 83
           C IE  + +  R+D +++G+    +PR+AD+L+  G VT      L+ +YE+ PEPK VI
Sbjct: 53  CFIEFAALIGSRFDFDRFGLVPRCSPRQADLLITAGTVTMKMAPALVRLYEQMPEPKYVI 112

Query: 84  AVGACALSGGIFKEGH---IHGPVDKVIPVDAKLPGCPPRPSEIISAVV----SIAPDAL 136
           A+GAC ++GG+F       + G VDK++PVD  +PGCPPRP  II A+V     +A D++
Sbjct: 113 AMGACTITGGMFSADSTTTVRG-VDKLLPVDVYIPGCPPRPEAIIDAIVKLRKKVANDSI 171

Query: 137 AAKEKLL 143
             + KLL
Sbjct: 172 QERGKLL 178