Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 185 a.a., NADH dehydrogenase (ubiquinone), 20 kDa subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.7 bits (213), Expect = 2e-22
 Identities = 37/115 (32%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 18  TGGCNGCDIEIVSCLAPRYDIEQYGIYVHNNPREADVLVVTGPVTGAWEKRLLEIYEKTP 77
           T G   C +E++ C   RYD++++G     +PR++DV++V G +T      L ++Y++  
Sbjct: 59  TFGLACCALEMIHCACARYDLDRFGTVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMA 118

Query: 78  EPKIVIAVGACALSGGIFKEGH-IHGPVDKVIPVDAKLPGCPPRPSEIISAVVSI 131
           EP+ VI++G+CA  GG +   + +    D+++PVD  +PGCPP    ++  V+ +
Sbjct: 119 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQL 173