Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 265 a.a., NADH-quinone oxidoreductase subunit B family protein from Rahnella sp. WP5

 Score =  119 bits (297), Expect = 5e-32
 Identities = 62/146 (42%), Positives = 90/146 (61%), Gaps = 9/146 (6%)

Query: 8   KRSINVCLVNTGGCNGCDIEIVSCLAPRYDIEQYGIYVHNNPREADVLVVTGPVTGAWEK 67
           +RS  V  V+ GGCNGC+IEI + ++P +D E++GI V  +PR AD+L+ TG VT A   
Sbjct: 36  RRSAYVYRVDCGGCNGCEIEIFAAISPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRI 95

Query: 68  RLLEIYEKTPEPKIVIAVGACALSGGIFKEGH-IHGPVDKVIPVDAKLPGCPPRPSEIIS 126
             L  ++  P+PKI I+ GAC  SGGIF + + + G  DK++PVD  +PGCPP P+  I 
Sbjct: 96  PALRAWDSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATIY 155

Query: 127 AVVSIAPDALAAKEKLLNQKLKEEKN 152
                     A    LL+QK+K +++
Sbjct: 156 --------GFAMALGLLDQKIKGQQH 173