Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis JJ

 Score = 55.8 bits (133), Expect = 4e-13
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 18/138 (13%)

Query: 11  INVCLVNTGGCNGCDIEIVSCLAPRYDI--------EQYGIYVHNNPREADVLVVTGPVT 62
           + V  V    C GC + +        D+         Q    V   P + D++++ G V 
Sbjct: 2   VKVAHVQLSSCCGCLVSLADTYEQLLDVLGAIDLVYSQTLADVREIPDDVDIVLLEGSVC 61

Query: 63  GAWEKRLLEIYEKTPEPKIVIAVGACALSGGI--FKEGH-----IH---GPVDKVIPVDA 112
            +    +    E   + KI++A+GACA SG I  F +G+     +H    P+ +V+  D 
Sbjct: 62  LSDHHAMEVALESRKKGKILVALGACAASGNITRFSKGNQMSKPVHDSFAPLTEVVKCDL 121

Query: 113 KLPGCPPRPSEIISAVVS 130
            +PGCPP P  I++ V++
Sbjct: 122 AIPGCPPSPESIVAVVLA 139