Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis JJ

 Score =  159 bits (403), Expect = 1e-44
 Identities = 78/145 (53%), Positives = 102/145 (70%), Gaps = 9/145 (6%)

Query: 1   MIKDFVRKRSINVCLVNTGGCNGCDIEIVSC-LAPRYDIEQYGIYVHNNPREADVLVVTG 59
           M+K+  RK++I+V LV TGGCNGCDIE+V+C L+P YD EQY +++  NPREADVLVVTG
Sbjct: 1   MLKELSRKKNIHVMLVYTGGCNGCDIEVVNCVLSPFYDAEQYNVFLTWNPREADVLVVTG 60

Query: 60  PVTGAWEKRLLEIYEKTPEPKIVIAVGACALSGGIFK--------EGHIHGPVDKVIPVD 111
            VT A    L +IY++ PEPK V+A GACAL GG++            I GPV+ +IPVD
Sbjct: 61  CVTKAVSASLKKIYDEIPEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVD 120

Query: 112 AKLPGCPPRPSEIISAVVSIAPDAL 136
            K+PGCPPRP ++I+ +V   P  L
Sbjct: 121 IKVPGCPPRPEDVITGIVKALPKIL 145