Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 347 a.a., NADH dehydrogenase subunit H from Sinorhizobium meliloti 1021

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 30/253 (11%)

Query: 5   LMYALYAFLVGGILLGFHRKLMARVQCRPGPPII------QYLIHTFKFYFKELTFPISA 58
           L+ AL  F+   +L    RK+ A VQ R GP ++      Q      KF FKE   P  A
Sbjct: 22  LLVALLLFIAYVLLAD--RKIWAAVQLRRGPNVVGPFGLFQSFADLLKFVFKEPVIPAGA 79

Query: 59  GNPLYVFVALMDVMVWMSALSIAVVFESSLLILIGLYIL-----QKIVEHGC---GLSSG 110
              +++   L+ V + ++A ++  +  + ++  I + IL       +  +G    G +S 
Sbjct: 80  NKTIFLLAPLVSVTLALAAWAVIPLNANWVIANINVGILFVFAISSLEVYGIIMGGWASN 139

Query: 111 SPYGKVGGVRSVFSAAA-EIPLFAAAGIVYTVTHSLIIGDIINYQAVNGPLIFQLP---- 165
           S Y  +G +RS     + E+ +      V     SL + DI+N Q      +  LP    
Sbjct: 140 SKYPFLGALRSAAQMVSYEVSIGFVIVTVLLCVGSLNLTDIVNAQNDGLGTMLGLPASFL 199

Query: 166 ----ICAFAVFVL----VLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAW 216
               +  F +F++     L++    PF + + + ++++G++ E+      + M+G+  A 
Sbjct: 200 DWHWLSLFPMFIIFFISALAETNRPPFDLPEAESELVAGFMVEYGSTPYMMFMLGEYAAI 259

Query: 217 FVLLWLFMALFLG 229
            ++  L   LFLG
Sbjct: 260 CLMCALTTILFLG 272