Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 328 a.a., NuoH2 NADH:ubiquinone oxidoreductase subunit 1 (chain H) from Sinorhizobium meliloti 1021

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 51/308 (16%)

Query: 18  LLGFHRKLMARVQCRPGPP------IIQYLIHTFKFYFKELTFPISAGN----------- 60
           L    RK+   +Q R GP       ++Q +    K   KE   P  A             
Sbjct: 28  LTWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILAL 87

Query: 61  --PLYVFVALM----------DVMVWMSALSIAVVFESSLLILIGLYILQKIVEHGCGLS 108
             P  VF A+           ++ +++S L++A++F   +  +IGL +   I     G +
Sbjct: 88  APPFVVFAAIPFGESVSVLGNEITLYISNLNVALLF---VFAVIGLEVYGVIFG---GWA 141

Query: 109 SGSPYGKVGGVRSVFSAAA-EIPL-FAAAGIVYTVTHSLIIGDIINYQAVNGPLIFQLPI 166
           + S Y  +G +R+     + EIP+ FA  G+V  +  S+ + DI+  Q     +++Q PI
Sbjct: 142 ANSKYAVLGSLRTCAQMISYEIPMGFAVIGVVM-LAQSMSLLDIVRAQTDVWNVVYQ-PI 199

Query: 167 CAFAVFVLVLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAWFVLLWLFMA 225
             F  FV  L++A   PF + + + D+ +G+ TE+ G   A+ M+ + +   ++  L + 
Sbjct: 200 GFFVFFVAGLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFALFMVSEYVVMVLVSVLTVI 259

Query: 226 LFL----GPLIVASPVLTLLGMFVLTIIISFICALT-------PLLAPNHSVMLQITIAS 274
           LF     G LI   P+L  L      + +      T        L+A    V+L +++A+
Sbjct: 260 LFFGGWNGVLIPLPPLLWFLLKVAFFVYLFMWFRFTFPRYRYDQLMAIGWKVLLPLSLAN 319

Query: 275 LTLIDLAY 282
           + +  + +
Sbjct: 320 IIISGVVF 327